| New model in OGS2.0 | DPOGS201194 |
|---|---|
| Genomic Position | scaffold3202:- 30255-36902 |
| See gene structure | |
| CDS Length | 1704 |
| Paired RNAseq reads | 900 |
| Single RNAseq reads | 2506 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014265 (1e-111) |
| Best Drosophila hit | CG5535, isoform B (2e-140) |
| Best Human hit | high affinity cationic amino acid transporter 1 (8e-96) |
| Best NR hit (blastp) | FI06577p [Drosophila melanogaster] (2e-169) |
| Best NR hit (blastx) | GF25230 [Drosophila ananassae] (6e-147) |
| GeneOntology terms | GO:0006865 amino acid transport GO:0015326 cationic amino acid transmembrane transporter activity GO:0016020 membrane GO:0003333 amino acid transmembrane transport GO:0015171 amino acid transmembrane transporter activity |
| InterPro families | IPR002293 Amino acid/polyamine transporter I IPR015606 Cationic amino acid transporter IPR004841 Amino acid permease domain |
| Orthology group | MCL10170 |
Nucleotide sequence:
ATGTTCAGTACGCTGGGTGTGGGGGTGTACGTCCTAGCTGGTGATGTGGCCAAGAATTAT
GCTGGACCTGCTGTGGTTCTATCGTTTCTTTTGGCTGCGGTCGCTAGCGTTTTCGCCGGT
CTCTGTTACGCTGAATTCGGTGCTCGCGTACCGAAGGCCGGCTCCGCTTACGTTTACAGC
TACGTCTGCGTTGGAGAGTTCATTGCCTTTATCATTGGATGGAATCTGATATTGGAGTAT
ATTATAGGTGCGGCGTCTGTGGTGAAGGCGCTCAGTGAGTACCTGGACTCGTTGCTGGAC
AAGTCTATCTCCAGTCAGCTGTACTCCTGGATGCCGATGGACTCCCCTCACCTCGCCAAA
TACCCGGATCTGTTCGCCTTCCTCGTCATCATGCTGTTCTCTGGTCAGTCAACAACTATA
CATTCTTCTATAGCTGCTGTGTTAAGATTTGAGACAGCTCTTGATAAATATGTACCAGGT
ACGAAATGGGCTTCGCTGATTGAGGAGGGTGACATACTTTTTTTTATATCAATTTCAGTG
GGTCTTGCATTCGGTGTGAAGGAGTCGACCAAATTCAATAACTTCTGTACCGGAGTCAAT
CTGTGTGTAGTGCTGTTTGTCATTATATCTGGATCATTCAAAGCTGATACAAAGAACTGG
CGCATCCCTGAGTCGGAGGTGCCACACGACGGTAAAAAGAACTTCGGCAGTGGAGGCTTC
GCCCCCTACGGCCTGGCCGGGGTCGTGAAGGGTGCTGCGGTGTGCTTCTATGGGTTCATT
GGTTTCGACTGTGTGGCGACTGCTGGCGAGGAAGCTCGTCGTCCTCAGAAGTCGATTCCG
TTCGCGGTGGTGGTGTCGCTACTTGTGGTGTTCCTCGCGTACTTCGGCGTGTCTTCAGTG
CTGACCCTCATGATGCCGTATTACATGCAGGACGAGAAAGCTCCGTTCCCTTTCGTGTAC
GACCAGCTAGGCTGGACGTGGGCCAAGTACGCCGTCAGTGTCGGAGCAATTTGTGCTTTA
TTGTCTAGTCTGCTGGGAGCCGTGTTCCCCCTCCCTCGTATTATCTACGCGATGTCTTCG
GACGGTCTGTTGTTCCGCTGGCTGGGAGCCGTCAGCGAGAAACATCAGACGCCACTCGTG
GGGACCATGGTCGCTGGTCTGCTTACTGGAACCCTGGCCATGATCTTCGAGCTGGAGCAG
CTGATCCACATGATGTCTATCGGGACCCTGCTGGCCTACTCCATGGTCGCCTCCTGTGTT
ATGCTGTTAAGGTACCAGAGCTCCCAGTCGCCTCACCGCGCGCCGGAGCCCGTCCGTCCG
TGTGTCCGCGGCCTGCTCCGTCAGTGTGTGAATTTGGACCGTGTGACGTCACCGTCTCCG
CTCAGCTCCACCGTCGCCACCACACTCGTCACGTTGTACGGAGTATGGTCTTTGGTACTC
ATGAACAGTATCCATCAGCGCGGGGAGGCGGTGCTCTTAGGTGATCCGGCGGCCGTCTGC
GAGGTGTCTGTGGGCGCCGCCCTGGTCGTGTTCACACTGTTCGCGATATCAAGACAACCT
GTCTCCGAAAAGAAATTGGCATTCTCGGTGCCGTTGGTGCCGTGGCTGCCGGGTGTGAGT
GTGTTGTTGAACGTGTACCTCATGTTGAACCTGGACCACGCCACATGGATACGGTTCGCG
GTCTGGATAGCAGCCGGTGAGTAG
Protein sequence:
MFSTLGVGVYVLAGDVAKNYAGPAVVLSFLLAAVASVFAGLCYAEFGARVPKAGSAYVYS
YVCVGEFIAFIIGWNLILEYIIGAASVVKALSEYLDSLLDKSISSQLYSWMPMDSPHLAK
YPDLFAFLVIMLFSGQSTTIHSSIAAVLRFETALDKYVPGTKWASLIEEGDILFFISISV
GLAFGVKESTKFNNFCTGVNLCVVLFVIISGSFKADTKNWRIPESEVPHDGKKNFGSGGF
APYGLAGVVKGAAVCFYGFIGFDCVATAGEEARRPQKSIPFAVVVSLLVVFLAYFGVSSV
LTLMMPYYMQDEKAPFPFVYDQLGWTWAKYAVSVGAICALLSSLLGAVFPLPRIIYAMSS
DGLLFRWLGAVSEKHQTPLVGTMVAGLLTGTLAMIFELEQLIHMMSIGTLLAYSMVASCV
MLLRYQSSQSPHRAPEPVRPCVRGLLRQCVNLDRVTSPSPLSSTVATTLVTLYGVWSLVL
MNSIHQRGEAVLLGDPAAVCEVSVGAALVVFTLFAISRQPVSEKKLAFSVPLVPWLPGVS
VLLNVYLMLNLDHATWIRFAVWIAAGE