| New model in OGS2.0 | DPOGS203908 |
|---|---|
| Genomic Position | scaffold2:- 795930-830546 |
| See gene structure | |
| CDS Length | 4266 |
| Paired RNAseq reads | 2386 |
| Single RNAseq reads | 6662 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000486 (0.0) |
| Best Drosophila hit | period (1e-101) |
| Best Human hit | period circadian protein homolog 2 (6e-28) |
| Best NR hit (blastp) | period protein [Danaus plexippus] (0.0) |
| Best NR hit (blastx) | period protein [Danaus plexippus] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0007623 circadian rhythm GO:0005737 cytoplasm GO:0007624 ultradian rhythm GO:0048512 circadian behavior GO:0045433 male courtship behavior, veined wing generated song production GO:0045475 locomotor rhythm GO:0008062 eclosion rhythm GO:0005515 protein binding GO:0007617 mating behavior GO:0048148 behavioral response to cocaine GO:0007619 courtship behavior GO:0003712 transcription cofactor activity GO:0045187 regulation of circadian sleep/wake cycle, sleep GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0042745 circadian sleep/wake cycle GO:0007622 rhythmic behavior GO:0003714 transcription corepressor activity GO:0009416 response to light stimulus GO:0009266 response to temperature stimulus GO:0007165 signal transduction GO:0006355 regulation of transcription, DNA-dependent GO:0004871 signal transducer activity GO:0046982 protein heterodimerization activity GO:0007620 copulation GO:0007616 long-term memory GO:0009649 entrainment of circadian clock GO:0043153 entrainment of circadian clock by photoperiod GO:0006979 response to oxidative stress GO:0008340 determination of adult lifespan GO:0001306 age-dependent response to oxidative stress |
| InterPro families | IPR000014 PAS IPR022728 Period circadian-like, C-terminal IPR013767 PAS fold IPR013655 PAS fold-3 |
| Orthology group | MCL16314 |
Nucleotide sequence:
ATGAGTGAGAGAGCCGGTTGCCTTTACCCTTTTCCTACACTTTCCCACCTTTTCCCTTTT
CCTTTTCCCAACCTTTCTCCTTCCTCTTCCCCAATCAAGGGCAGCAACGCATCCGCAAAA
TACTTTTGCGGAAGTTCATGGGCGAAGAAATTTATAGTCATGGACAACTTGGATGACTCC
GAGAACAATGCTAAGATATCCGACTCCGCATATTCCAACAGCTGCAGCAACAGTCAATCG
AGGAGAAGCCACAGCTCCAAATCTACACATTCTGGAAGCAATTCAAGTGGAAGCAGTGGG
TATGGCGGTAAGCCATCGACTTCCGGCTACAGCAATAACTTAAGTCAGCCACCGGAAAAA
TGGATTAAAGAAAAAGAATCAAAAAAGAAAAAGCCTGTACAGGTAGAATTGAAACCATCT
GAAGAGAAAATAGAAGAATGTCCACAGGAGCTCGCACCTGTATGTGAGGCGCCTAAAGAA
GAAACTAAAGATGTTAACCGCACCCCGACTCCATCTTTGGTGCAAACCGAAAAGGGTCCG
GAGAACATGGAAATAACAACGTTAAAAAGAAACGATGAAAAAGATGAGTCTGTTTCGTCT
AACGCGCCTATGGTGACTTCGCTCAATTTAGTCACGGGACGCTCAAATTCTCCTTCCTGT
CCTGAAAGCTTCTCCTGTGTCATATCAATGCAAGATGGTGTGGTCATGTTCACAACGTCC
TCCATAGTTACTGCTCTCGGCTTTCCAAAGGACATGTGGATTGGCAGATCATTTATAGAT
TTCGTTCATCCAAGGGATCGGAACACCTTTGCATCGCAGATCACTAGTGGTCTGGCTGTG
CCTAAAAATGTTAATGGTACGCAAGAAAAAGCTCCTGTTCCAGGAAATCATGTTTCGACG
ATGGTATGTCGCATACGGCGTTACAGAGGTCTCAATCTGGGTTTCGGCATTAAAGAGAAA
ACCGTTTCATTTATGCCGTTCCTATTAAAGTTCTTCTTCAAAAACATTAACGATGAAGAT
GGCCAGGTTATATACTTGGTTATACAGGCGACACCATTTTTTTCCGCTTTTAAAACTTCG
GCAGAGATAATACATAATGCAATACCATTTGTGATAAGGCACTCGGCTACGGGAAGTTTA
GAGTACATAGACCATGAATCGGTGCCTTACCTTGGCTACTTGCCACAGGATATTGTTGAG
AAAGACGCCTTGCAGTTGTACCATCCAGGCGATCTTGGATACCTGAGGCAGATTTACGAG
ACGATTGTAAAGGAAGGCGGAGTTCAACGGTCCAAACCTTACAGAATGATGGCTCAGAAC
GGGGATTATCTGAAATTAGAGACGGAATGGTCTTCATTCATAAATCCTTGGTCAAAGAAA
CTAGAATTTGTTATTGGTAAACACTACATCGTGGAGGGTCCATCGAATCCAGACGTTTTC
CAAATGCCTGATCCTGAAAAATCTCTTAAATTTACCGATGATGAGAAGGCTAAAGCTGCT
GCACTAAGGGAAAAAATTACTAGAGTTATGACCGAGGTCCTTACAAAACCAGCTGAAATA
GCTAAACAGCAGATGAGTAAAAGATGCCAGGATCTCGCTTCCTTCATGGAGAGTCTGATG
GAGGAGACACCCAAGATAGAAGAAGAACTACGTCTTGAAATACAGGATCAAGATCATAGT
TATTATGAACGTGATTCTGTAATGCTCGGCGGTATCTCGCCACACCACGACCACAGCGAC
AGCAAGTCAGGCACCGACACACCAGTCAGCTACAACCAACTTAATTACAACGAAACTCTT
CAAAGATATTTTGACAGTCACGAACCATACAGCTTCGAAGATTATTATTTAATGGATAGC
GAAAATAAGATCCAAATGAAAGAAAATGAAGAAGGTTCTGTGAGCAAATGTATATCTCCG
ATGGCACAAGCTTCGACGGAGTGTGATCGGACCAGTTCCTCCGAATGCAGTGGTCTTGGT
ATAGGGAACTCTTGTCCTTGTGACTACCAGCCAATGCGATTGACAGAGTCATTGCTTAAC
AAGCACAACGCAGAAATGGAAAGAGAACTAATAAAAATGTATCGTGAAAACCGTTCAAGT
AAAGGAGATAGAGAGAAAGCCTCCAACGAAACGAGACAAAAGAAGAAACAACATTTAGCA
AGATGTAATGCGGCTTTTCAACCGACGTCGTTGGGACTGCCCGATTCTCAGCCCCATGGA
GTGAAGCGTCCCTCAAAACAGGCGGAAGAAGCCAGCGCCCACAAACACAGATGCTCGTCG
CCACGTCCGATCCGACATTCAGCGGTATCAAACAACCAGCCAGTAGCCATCAACTCAGTC
GTGACTAATATGTGGCCTACCACTGCAGCTAACACCATGAACACGTGTCACCTCCAAGGA
TTGGGGATGCCACCACAGGTTTCATTCATGACACCAATGGCTATGCCGGGTCAATATCCG
ATGTGCTATATTCCAGTGCCCGTACAACCTATACAGCCGCAGTCAGATTCATATCAAAAT
ACAAATTCAAATAACAATTATCCTTATCAACCTCAACCGATGCCATACATGATGTATGGC
CATGCTATGTACGGATCTCCGTTTATGTATCCGTCTGTGGATCCGAGGACGTACGTGCCT
CAAACTACGTCCGGTCATAACATACCACCTTTCGGACTGTCCAGTAGTAACTACCAAGAA
GCTTGTAAACTAACTGTGCCATTGAAGACATCTAAAGCGTGTCGCATCACAAGGGAGAAT
CACAATCAAGCACTAAGAAGAGACGGCGTCAATTATTCAGCTGGCACATCGAATCGGAAT
ACCGAAGTGAATAACGATAAGGACATTCGTAAGCCTCGTGCCACAAACAGTAATCGCACA
GTTGAGAAAACTGACGAAGAATCAAGTTTCTCATCGTTTTATTCATCTTTCTTTAAAACT
GAATCTGGTAGTGCTGAAGATAGCGATGCCAAAAAGAGTTGGCACAAAAATCATAAGGGC
GATGATCTTATGTCATTGCAAAGTTCTACAGAGGCTGTCACGTATGCACCAAACAAGAGC
CAGGCACAACAGAAAAAGGTTGATCCGTCGTGGGTTGAAGAAGTTTGCGTAACATCAGAA
TTAATTTACAAATATCAGATTCGGACGAAGAGTTTAGAGGAAGTACTTTCGGAAGATAAA
AAGAAATTGGAAACTTTGGAACAGCCTCTACTCGTGAGTCAACAGCTGGGTCAATTGTAC
TTGGATCTGCAACTTCAAGGAGTTGCTGCCAGATTGACTTTAGAAGAAGGAATCACCAGT
TCTAGCAGTTCGGGTGAAGAGAATTCGTCGATGTCATCTAAGAAGATACGTCGTAGGAAA
CGGGAATACAGCAAATTAGTGATGATATATGAAGAGGACGCTCCACTACCACCTCCAGAT
AACGTTGCCGGTAAACAGCGGCACGGCGCTACCTGCGCAAGAGTCGCATTCCGTCACCCA
CGTTCACGATTGGCCGTTGAGCCTGTTAAGGCTTCGAAACAGTTTTTAGAAGTCGCTTTA
GAAATCACGAAAATGTTTCGATTCGCTTGCTTCTTGGCTTCGATGAGCTTGGCATCATCA
CAGTTGACAATCGACGGGATCAGATGTGGTCAGCTAACCTGCACTTTGGAAGAGTACTGC
TCCCCAGAGACTAACAGATGTGCTCCCTGCAGCATCGTCTGTAACAATACCCATCACAAC
TACGACTCTGGCCTATGTATCAAGGAGTGCCAAGGTTACCTTTTGGACTTAAGGTACATG
CGAAGATCTGAATATGCTGATCCTCCATCTAATATAACTAGTGTTCAGCGTCAAGCTCAG
ACAGCGCTGATTGTGAGTATTGTCGCGCTGGCGGTGTTGATACTCATTCTTATCATCGTG
TGTCGTGGCAAAGTTTCGTGGCAATACATCATGAAAAAATTGCAGCCTTCGAAGAATCGT
GTGAAGCATTATCCAACCGATCTAACTCATCATAATCCACACGCCGAAATGCCAAAACCA
AAGCCCGAATTGAAGCTTGAGATAAGAAATCCGGAACCCCCGAAGCGAAACCCGCAACCA
CTCAATGCCAGGGATTTAGACGCTAGAACACAGACTGATAAAAGTCAAGGAGCAACCACA
CCGAAGACGATTAGCACTGCTATTAGCAATAGACATCCTGCTGAAGATACTACTCTTGAT
TTCTCTTATGACAATATGGGCATGAATGTCACACCACCAGAACAAGCAACTAGTCATAGG
TTCTGA
Protein sequence:
MSERAGCLYPFPTLSHLFPFPFPNLSPSSSPIKGSNASAKYFCGSSWAKKFIVMDNLDDS
ENNAKISDSAYSNSCSNSQSRRSHSSKSTHSGSNSSGSSGYGGKPSTSGYSNNLSQPPEK
WIKEKESKKKKPVQVELKPSEEKIEECPQELAPVCEAPKEETKDVNRTPTPSLVQTEKGP
ENMEITTLKRNDEKDESVSSNAPMVTSLNLVTGRSNSPSCPESFSCVISMQDGVVMFTTS
SIVTALGFPKDMWIGRSFIDFVHPRDRNTFASQITSGLAVPKNVNGTQEKAPVPGNHVST
MVCRIRRYRGLNLGFGIKEKTVSFMPFLLKFFFKNINDEDGQVIYLVIQATPFFSAFKTS
AEIIHNAIPFVIRHSATGSLEYIDHESVPYLGYLPQDIVEKDALQLYHPGDLGYLRQIYE
TIVKEGGVQRSKPYRMMAQNGDYLKLETEWSSFINPWSKKLEFVIGKHYIVEGPSNPDVF
QMPDPEKSLKFTDDEKAKAAALREKITRVMTEVLTKPAEIAKQQMSKRCQDLASFMESLM
EETPKIEEELRLEIQDQDHSYYERDSVMLGGISPHHDHSDSKSGTDTPVSYNQLNYNETL
QRYFDSHEPYSFEDYYLMDSENKIQMKENEEGSVSKCISPMAQASTECDRTSSSECSGLG
IGNSCPCDYQPMRLTESLLNKHNAEMERELIKMYRENRSSKGDREKASNETRQKKKQHLA
RCNAAFQPTSLGLPDSQPHGVKRPSKQAEEASAHKHRCSSPRPIRHSAVSNNQPVAINSV
VTNMWPTTAANTMNTCHLQGLGMPPQVSFMTPMAMPGQYPMCYIPVPVQPIQPQSDSYQN
TNSNNNYPYQPQPMPYMMYGHAMYGSPFMYPSVDPRTYVPQTTSGHNIPPFGLSSSNYQE
ACKLTVPLKTSKACRITRENHNQALRRDGVNYSAGTSNRNTEVNNDKDIRKPRATNSNRT
VEKTDEESSFSSFYSSFFKTESGSAEDSDAKKSWHKNHKGDDLMSLQSSTEAVTYAPNKS
QAQQKKVDPSWVEEVCVTSELIYKYQIRTKSLEEVLSEDKKKLETLEQPLLVSQQLGQLY
LDLQLQGVAARLTLEEGITSSSSSGEENSSMSSKKIRRRKREYSKLVMIYEEDAPLPPPD
NVAGKQRHGATCARVAFRHPRSRLAVEPVKASKQFLEVALEITKMFRFACFLASMSLASS
QLTIDGIRCGQLTCTLEEYCSPETNRCAPCSIVCNNTHHNYDSGLCIKECQGYLLDLRYM
RRSEYADPPSNITSVQRQAQTALIVSIVALAVLILILIIVCRGKVSWQYIMKKLQPSKNR
VKHYPTDLTHHNPHAEMPKPKPELKLEIRNPEPPKRNPQPLNARDLDARTQTDKSQGATT
PKTISTAISNRHPAEDTTLDFSYDNMGMNVTPPEQATSHRF