| New model in OGS2.0 | DPOGS202707 |
|---|---|
| Genomic Position | scaffold1747:+ 262-2049 |
| See gene structure | |
| CDS Length | 1788 |
| Paired RNAseq reads | 1440 |
| Single RNAseq reads | 3111 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008387 (0.0) |
| Best Drosophila hit | CG1972 (0.0) |
| Best Human hit | integrator complex subunit 11 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to CG1972 CG1972-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG1972 CG1972-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006379 mRNA cleavage GO:0005847 mRNA cleavage and polyadenylation specificity factor complex GO:0006378 mRNA polyadenylation GO:0016787 hydrolase activity |
| InterPro families | IPR022712 Beta-Casp domain IPR001279 Beta-lactamase-like IPR011108 RNA-metabolising metallo-beta-lactamase |
| Orthology group | MCL14232 |
Nucleotide sequence:
ATGCCCGAAATTAAGATAACTCCTTTGGGAGCGGGTCAGGATGTTGGACGTAGTTGTATT
TTGTTGTCGATGGGAGGTAAAAATATTATGTTGGACTGTGGTATGCACATGGGGTACAAT
GATGAGAGACGTTTCCCGGATTTTTCATACATAGTGCCAGAGGGTCCTATCACAAGTCAA
ATAGATTGTGTAATAATATCACACTTCCACCTCGACCACTGCGGTGCACTCCCATACATG
TCAGAAATGGTTGGTTATACGGGACCTATTTATATGACTCACCCAACAAAAGCTATAGCT
CCAATTTTGTTAGAAGACATGAGAAAAGTTGCAGTTGAAAGGAAAGGAGAATCAAATTTT
TTTACTTCACAAATGATAAAAGATTGTATTAAAAAGGTAACAGCAGTGACACTACATCAA
TCTGTAATGGTGGATAATGAATTAGAAATCAAAGCTTATTATGCCGGCCATGTCTTAGGT
GCTGCCATGTTCTGGATAAGAGTTGGATCACAATCAGTCGTATACACTGGAGACTATAAC
ATGACACCGGACAGACATCTAGGGGCAGCCTGGATTGATAAATGTAGGCCTGATTTGCTA
ATATCAGAGTCAACATATGCTACAACTATAAGGGATTCAAAACGTTGCCGAGAAAGAGAT
TTCTTAAAGAAAGTCCATGAGTGTGTAGAGAAAGGTGGAAAGGTTCTAATACCTGTCTTT
GCTCTCGGTAGAGCACAAGAGTTATGTATACTGCTGGAGACATACTGGGAGAGAATGAAT
TTAAAATACCCAGTGTACTTCGCATTAGGTTTAACGGAGAAGGCCAACAACTATTATAAA
ATGTTTATAACATGGACAAACCAGAAGATACGTAAAACTTTTGTACAAAGAAACATGTTT
GATTTTAAGCATATTAAACCATTTGATAAGTCATACATCGACAACCCCGGTGCTATGGTG
GTTTTTGCTACTCCGGGAATGTTACATGCTGGTTTATCCCTAAATATATTTAAGAAGTGG
GCTCCCTATGAACAAAACATGTTGATCATGCCAGGTTTCTGTGTTCAAGGCACAGTTGGA
CACAAAATTCTAAATGGCGCGAAGAAAATTGAATTCGAGAACCGTCAAGTAGTTGAAGTT
AAAATGGCTGTCGAATACATGTCGTTTTCAGCTCACGCAGACGCGAAAGGCATCATGCAG
CTGATACAATACTGTGAACCAAAGAACGTGTTGCTCGTCCACGGGGAGGCACAGAAGATG
GAGTTCCTAAAGGACAAAATCGAAAAAGAATTCAAGATCAGTTGTTACATGCCCGCCAAC
GGTGAAACGGCGATAATAAATACTCCAACGAAGATCCCGATAGACGTATCGTTACGATTA
CTAAAGGCAGAAGCTGTGAGATACAACGCCCAGCCTCCAGACCCGAAACGGAGAAGAGTC
GTACATGGAGTGCTCTGTGTTAAGGACAATAGATTATCATTCTTAGATATAGATGAAATG
TGCGACGAGATCGGCATTAATAGGCACATCATTAGATTTACTAGCACGGTGCGTTTTGAT
GACGCCGGTTCAGCGATCAAAACTGCTGAGAAACTCAAGACATTGCTGGCAGAGAAGCTT
CAGGGTTGGTCGATTACTATATCCGATGGAAACATCTCAGTTGAGTCCGTCCTCATCAAA
GTTGAGGGGGAGGACGATAACACGAAAAGCATCTACGTGTCGTGGACAAACCAGGACGAG
GATCTGGGCAGTTACATTCTAGGTTTACTGCAGTCTATGGTACAGTGA
Protein sequence:
MPEIKITPLGAGQDVGRSCILLSMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ
IDCVIISHFHLDHCGALPYMSEMVGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNF
FTSQMIKDCIKKVTAVTLHQSVMVDNELEIKAYYAGHVLGAAMFWIRVGSQSVVYTGDYN
MTPDRHLGAAWIDKCRPDLLISESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVF
ALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRNMF
DFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPYEQNMLIMPGFCVQGTVG
HKILNGAKKIEFENRQVVEVKMAVEYMSFSAHADAKGIMQLIQYCEPKNVLLVHGEAQKM
EFLKDKIEKEFKISCYMPANGETAIINTPTKIPIDVSLRLLKAEAVRYNAQPPDPKRRRV
VHGVLCVKDNRLSFLDIDEMCDEIGINRHIIRFTSTVRFDDAGSAIKTAEKLKTLLAEKL
QGWSITISDGNISVESVLIKVEGEDDNTKSIYVSWTNQDEDLGSYILGLLQSMVQ