| New model in OGS2.0 | DPOGS202079 |
|---|---|
| Genomic Position | scaffold389:- 24937-41609 |
| See gene structure | |
| CDS Length | 1251 |
| Paired RNAseq reads | 108 |
| Single RNAseq reads | 243 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011301 (4e-101) |
| Best Drosophila hit | CG12594 (1e-22) |
| Best Human hit | collagen alpha-2(XI) chain isoform 3 preproprotein (7e-09) |
| Best NR hit (blastp) | PREDICTED: similar to CG12594 CG12594-PA [Tribolium castaneum] (9e-67) |
| Best NR hit (blastx) | PREDICTED: similar to CG12594 CG12594-PA [Tribolium castaneum] (3e-57) |
| GeneOntology terms | GO:0005198 structural molecule activity GO:0007155 cell adhesion |
| InterPro families | IPR008985 Concanavalin A-like lectin/glucanase IPR000884 Thrombospondin, type 1 repeat IPR013320 Concanavalin A-like lectin/glucanase, subgroup IPR012680 Laminin G, subdomain 2 IPR003129 Laminin G, thrombospondin-type, N-terminal IPR001791 Laminin G domain |
| Orthology group | MCL18340 |
Nucleotide sequence:
ATGGCATCTCGGATGTGCCGTGGCATTTCCAATGGATATATCTTGATGGTCGTTTTGTTT
TTGTCGGGGCAAGCTGTAGTTTGTGACAGCCAGTGCCCAAAGTTTGCAGAAAGGCCTCTG
GAAACGAGAGTTCAAGATGCTTCAATAGTTTTTAGGGCGGTGGTCGTTCAGGCACACTAT
CAGATAAAGACATTTGATTTGGCTTTAGTGTCAATATACAGAGGTGGAGTTGAGTTGGCA
TCGATCAGCCAATACGCAGGATCACCCTACAACACGACAGATAGGCAGGTAAATCTCAAA
ATCAATAATCAATTACGTGATTGCTTTAACTGGAGCATGGTCCAACAAAGCGAGCTTGTG
GTTTTCGCTCGTGTCAGTGAACCGGCTGTGGACCTGGAAACAACACCAGCTGATGGGCCC
TGGCTGGAAGCTACTGCAGCAGCAGTTCCTTGGAGCTTGGGAGTCGATATAGCAATATGG
AATGCTGTCGGCTGGGCTGGCTGGGGGGAGTGGGGTGTGTGTAGCAAGACGTGTGGTGGG
GGAAGACAAACCAGAAGAAGATACTGCTCAAGAAATTTTTGTGAAGGTTACGGAGAACAG
GGAAGGTCATGTAATTCCTTCAAATGTGATGGTACAATAAATCCTCTGGCACCAGACGCC
AGGCGAAATTTTCATCCAGCACAAGCCAGATGGGGTCTAGTACCAGATAGACCTCATGCC
TTTAGTCTGAAACCCAACTCTTATATCTGGATAGCGTCTTCCGAACTCTTCGCTCCAGGC
AAGACCTTCCCCAGAGAATTCACACTATTCATTTCTTTAAGATTAAGACCTGAGAGCGGG
GGTTACGGACAAGGAACGTTATTTTCAGTTCGTTCAAGACGTAAAACTGGTTCATTTTTG
TCTCTGGAACTAGCCGGGCGAGGAGCAGCTAGATTGGTTCATTCAGGTGCTGGAACTTCC
CGGTCTATATACCTCGCTGTCCCACTTTATGACTTTAGGTGGCACCACATCGCTATAAGT
GTCCATGACGACAACACTGTGAGAGTGTATGTGGATTGCCGATGGCTGAGGACTGACGTA
CTCGAAAAGGACGCTTTAGATACACCAAAGGACGCTGATCTCATTATAGGCTATCTCTTC
TCAGGGGACTTGGAACAAATGGTCGTTGTGCCGAAAGCCGGTCAAGCCCACGAGCAGTGC
TCTAGCCAAGTGACTGGCATAACACCATTCGTTACCCCGCGCGACACATAA
Protein sequence:
MASRMCRGISNGYILMVVLFLSGQAVVCDSQCPKFAERPLETRVQDASIVFRAVVVQAHY
QIKTFDLALVSIYRGGVELASISQYAGSPYNTTDRQVNLKINNQLRDCFNWSMVQQSELV
VFARVSEPAVDLETTPADGPWLEATAAAVPWSLGVDIAIWNAVGWAGWGEWGVCSKTCGG
GRQTRRRYCSRNFCEGYGEQGRSCNSFKCDGTINPLAPDARRNFHPAQARWGLVPDRPHA
FSLKPNSYIWIASSELFAPGKTFPREFTLFISLRLRPESGGYGQGTLFSVRSRRKTGSFL
SLELAGRGAARLVHSGAGTSRSIYLAVPLYDFRWHHIAISVHDDNTVRVYVDCRWLRTDV
LEKDALDTPKDADLIIGYLFSGDLEQMVVVPKAGQAHEQCSSQVTGITPFVTPRDT