New model in OGS2.0 | DPOGS209830  |
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Genomic Position | scaffold830:+ 86205-90525 |
See gene structure | |
CDS Length | 909 |
Paired RNAseq reads   | 955 |
Single RNAseq reads   | 2507 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008053 (2e-91) |
Best Drosophila hit   | Sphingosine-1-phosphate lyase, isoform B (4e-102) |
Best Human hit | sphingosine-1-phosphate lyase 1 (3e-79) |
Best NR hit (blastp)   | PREDICTED: similar to sphingosine phosphate lyase isoform 1 [Tribolium castaneum] (5e-114) |
Best NR hit (blastx)   | PREDICTED: similar to sphingosine phosphate lyase isoform 1 [Tribolium castaneum] (3e-111) |
GeneOntology terms    | GO:0008117 sphinganine-1-phosphate aldolase activity GO:0030176 integral to endoplasmic reticulum membrane GO:0030149 sphingolipid catabolic process GO:0019752 carboxylic acid metabolic process GO:0016831 carboxy-lyase activity GO:0030170 pyridoxal phosphate binding |
InterPro families    | IPR002129 Pyridoxal phosphate-dependent decarboxylase IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 |
Orthology group | MCL13719 |
Nucleotide sequence:
ATGCCGGTCTCGTCAGAAACTTATACCGTTGACATAGAGGCTGTCAAACGAGCTATAGGC
AGAAGGACATGTATGATAGTGGGTTCAGCTCCGAACTACCCGTACGGCACCATGGACGAT
ATAAAGTCGCTGTCAGACATAGCGCTGGAGTATGACGTGCCGTTACACGTAGACGCCTGT
CTCGGTGGGTTCATAGCGGCCTTCATGACGGAGGCTGGGTACAATGTACCCGTGTTCGAC
TTCAGACTGCCCGGTGTTGCCAGTATATCAGCTGACACCCATAAGTATGGATACGCGCCC
AAGGGTACGTCGGTGATAGTGTACCGTAAGGAAGAATACAGACATCACCAGTATACAGTG
AGCACCGAGTGGCCGGGAGGGGTGTACGGCTCGCCCACCGTTAATGGCAGTCGTGCGGGC
GGCCTGATAGCGGCGTGCTGGGCCACCATGATGTACGTCGGCCGCGAACAGTACGTGCGG
ATGGCGGGCGAGGTCGTCCACACGGCCAGGAGGATAGAGGACGAGATCCGTAAGATTAAT
GGATTGTTCATATTCGGCCAGCCCGCGACCACCGTGGTGGCGTTCGGGTCCAACAGCTTT
GACATCTTCAAACTAGCGGACCTCCTGCATCAGAAGGGTTGGAGCTTGAACGCCTTGCAA
TTTCCTTCCGGAATCCATATAGCGGTGACTCATGCCCACACTAGAGCTGGTGTCGCTGAC
AGGTTCTTGGCTGACCTGAAGGAAACTACAGCTGTTTGTATGAAGGAAGGAAGTGCTCCC
GTAGAGGGGAAGATGGCTATTTACGGTGTGGCACAGAGTATACCAGATAGAAGTCTAGTG
TCAGACATCACTAAATACTTCATCGATTCCATGTACTATTTACCCAAGCCCGGTGATGAT
GTGGAATGA
Protein sequence:
MPVSSETYTVDIEAVKRAIGRRTCMIVGSAPNYPYGTMDDIKSLSDIALEYDVPLHVDAC
LGGFIAAFMTEAGYNVPVFDFRLPGVASISADTHKYGYAPKGTSVIVYRKEEYRHHQYTV
STEWPGGVYGSPTVNGSRAGGLIAACWATMMYVGREQYVRMAGEVVHTARRIEDEIRKIN
GLFIFGQPATTVVAFGSNSFDIFKLADLLHQKGWSLNALQFPSGIHIAVTHAHTRAGVAD
RFLADLKETTAVCMKEGSAPVEGKMAIYGVAQSIPDRSLVSDITKYFIDSMYYLPKPGDD
VE