New model in OGS2.0 | DPOGS206648  |
---|---|
Genomic Position | scaffold174:- 71564-74167 |
See gene structure | |
CDS Length | 1011 |
Paired RNAseq reads   | 21 |
Single RNAseq reads   | 105 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | AlkB (2e-64) |
Best Human hit | alkylated DNA repair protein alkB homolog 1 (5e-48) |
Best NR hit (blastp)   | PREDICTED: similar to AlkB CG33250-PA [Apis mellifera] (2e-73) |
Best NR hit (blastx)   | GF20132 [Drosophila ananassae] (2e-74) |
GeneOntology terms   | GO:0016491 oxidoreductase activity |
InterPro families   | IPR005123 Oxoglutarate/iron-dependent oxygenase |
Orthology group | MCL16332 |
Nucleotide sequence:
ATGGAATCGAAGGAAAGTGCTAGAATACCTAGGGATGTATTTATGGAAACATTCAAATAT
TTTAAATCAAACAAACCAAAACCGTCTCTAGATAGAGTGATAACTACAGATTCTGATAAC
AGATTACTGCTGTTTCATAGAAGAGATATTATTGAAGACGTAAGGTCAAAATATTTGGGT
TTGCGATCTCTAAAGGAATGGAAAGCCTACTCGTTGAAGAGTAATCCCGGCTTAATATTA
ATAAGAAACCCTTTCACTAGTCTAGGCCAAAGGTTTTGGATAAGAAAATGCTTAGAAATC
TATCCAAAGAAACCAAATAGAACAAATATTGATGTAGAAACACATATAGATGACTGGTGG
TCGGAATGTCATTATAGTGAGAGAAATAATAGCAAGCTTCTTAAGAAACTGCGCTGGACA
ACATTAGGATACCATCATAACTGGGACACAAAAGTTTACACTGAAGAAAATAAAGGAGTA
TTTCCCAGTGAACTTTCAGAGTTAGCTGACATAGTAGCACATTATCTTGGCTATGAAGGA
TTTCGTGCAGAAGCAGCGATTGTTAATTACTATCACATGAGTTCCACACTTTCTGCTCAC
ACTGATCATTCAGAAATCAACTTAGAAGCACCTCTATTTTCATTTAGTTTCGGACAGTCG
TCGATATTCCTAATAGGTGGTCAAGATAAATTTATAAATCCAATTCCTATTTTACTGAAC
AGCGGTGACATAGTCATCATGTCAAAGGAAGCAAGGCTGTGCTATCACGCTGTCCCTAAA
ATATTACCTTCACCTACGACACCCTGGAATAATCAAGAAGATTCCGGAGGAATGGATTTT
AGTGCTGTTAAATTTAAATTCATAGATTATGATGTCAGTTCAGACTTTCACAGAAACATA
GATAATGTTGAATGGAGTCATTTCAACAATTATATTTGTGAATCAAGAATAAATATCAAT
GTCCGCCAGGTTTTAAATGAAAATCAAAACAGTCTGAACGATGTTATTTGA
Protein sequence:
MESKESARIPRDVFMETFKYFKSNKPKPSLDRVITTDSDNRLLLFHRRDIIEDVRSKYLG
LRSLKEWKAYSLKSNPGLILIRNPFTSLGQRFWIRKCLEIYPKKPNRTNIDVETHIDDWW
SECHYSERNNSKLLKKLRWTTLGYHHNWDTKVYTEENKGVFPSELSELADIVAHYLGYEG
FRAEAAIVNYYHMSSTLSAHTDHSEINLEAPLFSFSFGQSSIFLIGGQDKFINPIPILLN
SGDIVIMSKEARLCYHAVPKILPSPTTPWNNQEDSGGMDFSAVKFKFIDYDVSSDFHRNI
DNVEWSHFNNYICESRININVRQVLNENQNSLNDVI