| New model in OGS2.0 | DPOGS206667 |
|---|---|
| Genomic Position | scaffold174:+ 151462-152058 |
| See gene structure | |
| CDS Length | 597 |
| Paired RNAseq reads | 89 |
| Single RNAseq reads | 249 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008498 (4e-93) |
| Best Drosophila hit | Ykt6 (2e-76) |
| Best Human hit | synaptobrevin homolog YKT6 (3e-55) |
| Best NR hit (blastp) | PREDICTED: similar to lethal (1) G0155 CG1515-PA [Tribolium castaneum] (4e-83) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000021999 [Nasonia vitripennis] (1e-78) |
| GeneOntology terms | GO:0005484 SNAP receptor activity GO:0016192 vesicle-mediated transport GO:0030133 transport vesicle GO:0016021 integral to membrane |
| InterPro families | IPR001388 Synaptobrevin IPR011012 Longin-like IPR010908 Longin |
| Orthology group | MCL14588 |
Nucleotide sequence:
ATGGTGAGAGTATATTCTTTAGCGATTCTATACAAGGGGGTGAATAGTGCGACAACTCTT
AAGGCAGCATACGACCTACAAAGTTTTAGTTTCTTCCAAAGGACCTCCGTCCAAGAGTTT
ATGAGTTTTGTCAGCAAAACTATGGTTGAAAGGACACAGCCTGCTTCTAGACAGTCAGTA
AAAGAAGGTGAGTATATGGTGCAAGTGTATGTCAGAGCTGACAACTTAGCAGGAATACTC
ATATCCGATCATGAGTATCCAAACAGGGTTGCTCACACTTTAATCACAAAATTACTTGAT
GAATTCTCCGCTAAAGTGCCAGTTGATACATGGGCTACGGCAAATGAAACTACAGTAGAT
TTTCCAGTTTTACCACAATATTTAGCAAAATATCAAAATCCAAGGGAAGCTGATGCTCTG
ACGAAAATACAGAATGATTTGGATGAGACAAAAATCATTCTTCATGATACAATTAAAGCC
GTTTTAGAGAGAGGAGAAAAACTGGATGATTTAGTAGCTAAATCTGACGATCTCTCCATG
CACAGTAAGGCATTTTACAAGACGGCCCGCAAAACAAATAGTTGCTGTAACTTTTGA
Protein sequence:
MVRVYSLAILYKGVNSATTLKAAYDLQSFSFFQRTSVQEFMSFVSKTMVERTQPASRQSV
KEGEYMVQVYVRADNLAGILISDHEYPNRVAHTLITKLLDEFSAKVPVDTWATANETTVD
FPVLPQYLAKYQNPREADALTKIQNDLDETKIILHDTIKAVLERGEKLDDLVAKSDDLSM
HSKAFYKTARKTNSCCNF