| New model in OGS2.0 | DPOGS212196 |
|---|---|
| Genomic Position | scaffold197:- 159911-161060 |
| See gene structure | |
| CDS Length | 948 |
| Paired RNAseq reads | 875 |
| Single RNAseq reads | 3387 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000990 (4e-95) |
| Best Drosophila hit | CG11263, isoform B (6e-11) |
| Best Human hit | exonuclease 3'-5' domain-containing protein 1 (7e-21) |
| Best NR hit (blastp) | conserved hypothetical protein [Ixodes scapularis] (2e-26) |
| Best NR hit (blastx) | conserved hypothetical protein [Ixodes scapularis] (2e-25) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GO:0008408 3'-5' exonuclease activity |
| InterPro families | IPR002562 3'-5' exonuclease IPR012337 Ribonuclease H-like |
| Orthology group | MCL17216 |
Nucleotide sequence:
ATGGACAATCTATACATGAAAGGGGAACTTCTTCAACTTCACACAAAAAATAGTGAAGTT
ATCGAAGGCAGATTTTACAGCATTACTAACGATAAGTCAAAGATATCGCTATACGAAGTA
AAAGAATCACCGCAATCTGATAAAAATGAAGGTGTATGCCATTACTACGACACAGAAGTT
AGAAATATTGTGAAGTTGCAAGAGCCCAATGAACAAACATTTCTTAAAATAACTCAGAAA
GAATGTGAAGAAATATTAAAAATATCAAAAAAGTACGTTTTTATCAACCAAATTGACCAT
AGTTTTCATGATGCTATGGACGATTTGAATCAGTACAGCTTCATATGTATTAGCACAGAT
GGAGGTAACATGGGTAGAAAGTGTAAATTGCCCTTTCTAGTGCTTTCTACGCCAGCACAA
ATCTATATTTTTGATATACAAGTTCTACAGCACCACGCCTTTGATGCCGGATTGAAGAAA
CTTTTGGAAAGCGATCATCCCAAAAAGATAGTCCATGATTGTAGGAAAATATCAGATTGC
TTATATCATAAGCATAATGTTAAATTAAATTCAGTGTTTGATACTCAGGTTGGTGATTTG
ATAATAACGAGAAATAAGACAGGCCGACTTCCAAATAATGTTAAGTCATTGTCAGAATGT
CTCAACACATATCTAGGTTTGAGACTTAATACCATTCAGGACAAGTTGGACATAATTAAA
TGCAACGAGAGACCATTATCAACAACGATCAAAGAAAGTTTAGCAAGGAACGTATGCTAT
ATGCATCGTTTCTCAGAAATCATCAATGAACAGATGATGTTGCCGTTTGTTAGAGGAGTT
GAATGTTATGTTGAGAGCATTAGATCCTGTGATGACTTCAAGGCCTGGGAGCTGTGCGGC
AAACACGCTCAATTACCAAAGGATTTCAAAAGTGCAATCGAGTATTAA
Protein sequence:
MDNLYMKGELLQLHTKNSEVIEGRFYSITNDKSKISLYEVKESPQSDKNEGVCHYYDTEV
RNIVKLQEPNEQTFLKITQKECEEILKISKKYVFINQIDHSFHDAMDDLNQYSFICISTD
GGNMGRKCKLPFLVLSTPAQIYIFDIQVLQHHAFDAGLKKLLESDHPKKIVHDCRKISDC
LYHKHNVKLNSVFDTQVGDLIITRNKTGRLPNNVKSLSECLNTYLGLRLNTIQDKLDIIK
CNERPLSTTIKESLARNVCYMHRFSEIINEQMMLPFVRGVECYVESIRSCDDFKAWELCG
KHAQLPKDFKSAIEY