| New model in OGS2.0 | DPOGS212202 |
|---|---|
| Genomic Position | scaffold197:- 7358-10022 |
| See gene structure | |
| CDS Length | 1710 |
| Paired RNAseq reads | 13345 |
| Single RNAseq reads | 35240 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001168 (3e-140) |
| Best Drosophila hit | CG18811 (3e-33) |
| Best Human hit | caprin-1 isoform 1 (3e-28) |
| Best NR hit (blastp) | glycosyl-phosphatidyl-inositol-anchored protein [Bombyx mori] (1e-174) |
| Best NR hit (blastx) | glycosyl-phosphatidyl-inositol-anchored protein [Bombyx mori] (1e-153) |
| GeneOntology terms | GO:0008150 biological_process GO:0005811 lipid particle |
| InterPro families | ND |
| Orthology group | MCL18414 |
Nucleotide sequence:
ATGACCATTATTGAACATAAAATCCGGAACTTGGAAAAAAGGAAGGGCAAATTAACATCG
TACCGTGATTTGCAAAAAGCCGGTAAGGAATTAAACAGTGATCAAAAGGAAGCGGTGGCC
AAGTATGATGAGGTGGTTATAACCCTAGAGTTCGCTAGAGACCTCTCGAAACAAGTGGCT
TTGATAGCTATAGCGTCAGAACGTGAAGCCAAGAAACAAGCTAAGAAGGATGCCTGGGTT
CGTTATACGGCAGACACGAATAAAATACGTGAGGTACTCCTTATATTGGACTGCCTCATG
CAGCTGGGTAACGCGGAAGTTAGAGACGACTTCCTTAATGGTACCAATGGTGCAGTGAAA
TTAACTGAGGAGGATTTAAAAATCTTAGATAACTTGTATCCTGAAGTGACCCCTAAACAT
GAAGTGAATGAAGAAGGCCAGCCTGGTTTTCATGCGTATACAATAAAAGCTGCGGAACAT
CTGTATGCTATTATTGATGGAAAACCCAAAGAAGTCCTCGGCACCACATATGCCCATGTC
AAGGAAATAGTCACGGCCGTTCATGAGTGTGGCTACTTTGATAAATCAGCTGATGTTATC
CCTGAACCAGAGGAGATACAGAATGTGTGTGAAGAAGCACCAGAACAGACGGAAGAAATT
GAGGAGTCTGAGCCTGCTCCAATGTATGTGGCCCCTGTCCCTATGTCAGCCCCACCGGCA
GCCGTAGTTCCTGCCCCAGGATACCCACTAAGACCGATCCCCCCCATCACCCTTCAAGAA
ATTGAGAATGCTTATTTCTCACAACAATATCCCCAACAAAGGCCTATATCTGAAGTGATA
GGCTCCCAAAACTTCTTCTTCCTACAAGAATCTGAGATTGACAGTCCTGTAGGAACTCCA
CAACCTCCACAGATCATGAACCAGCCTTCTCCGCCAGGACCTATCCCAACACAGACATTT
ACTAATCAACACTTCGTCCAACTGCCTGGAGGTCGTGTTCCTGAACCTGGAACCATTCCA
ATGCCACCTCAACCTCACTTCCCCCCTCATCCAGACCACGCGGCTTATCAAGTTCCGATT
CCTCAAATCCATCCCCAACCTCACCACGTTCCTCAGTCAATCCCTCAACCGATGCAACAC
AACCAACCGATCCCACATATCGAGCAACAACCCAACTTTGAGCAGGAAGAATTGAAAGTT
ATATCACCCGTCGAAGACAAACCGGAAGACGAAGTAAAAGAAAGCGCCAGCCCGGAAAGA
GAAGATGGAGGGGAACGAAAAACACAAGGGCAGGGGGACGGACAGAACCGGTTTAGACGG
TACCGGGGTAACGGGAGGGGCTCGTCCAACGGATTCAGAGGTCGAGGAGCTTACACGAAC
AGGCAGAGCGAAGGATACCACCCTAGACACAACGACTACCAGAACAGGAGTAACAAAGAG
AGTTATCAGAACCGCCAGTACAACGACGGCTACCAGAACAGGCACGGCAAAGACAACTAC
CAGAACAGAAGCGGAAATGACTACTACGGCAACGGAGACAACGGGGACTCCCATCATAAC
GAGAACGGCTTACGTTATAACGACAACTCCAGCTACCAGCCAGGGTTCAAGAGCCGCGGC
AGAGGAGGCCCCCGCGGAGGAACACGGGGCGCTCCACGCACGCCGCGCACGAACCATCAG
TACAACCGTAAACAGGAAAACGTGGAATAG
Protein sequence:
MTIIEHKIRNLEKRKGKLTSYRDLQKAGKELNSDQKEAVAKYDEVVITLEFARDLSKQVA
LIAIASEREAKKQAKKDAWVRYTADTNKIREVLLILDCLMQLGNAEVRDDFLNGTNGAVK
LTEEDLKILDNLYPEVTPKHEVNEEGQPGFHAYTIKAAEHLYAIIDGKPKEVLGTTYAHV
KEIVTAVHECGYFDKSADVIPEPEEIQNVCEEAPEQTEEIEESEPAPMYVAPVPMSAPPA
AVVPAPGYPLRPIPPITLQEIENAYFSQQYPQQRPISEVIGSQNFFFLQESEIDSPVGTP
QPPQIMNQPSPPGPIPTQTFTNQHFVQLPGGRVPEPGTIPMPPQPHFPPHPDHAAYQVPI
PQIHPQPHHVPQSIPQPMQHNQPIPHIEQQPNFEQEELKVISPVEDKPEDEVKESASPER
EDGGERKTQGQGDGQNRFRRYRGNGRGSSNGFRGRGAYTNRQSEGYHPRHNDYQNRSNKE
SYQNRQYNDGYQNRHGKDNYQNRSGNDYYGNGDNGDSHHNENGLRYNDNSSYQPGFKSRG
RGGPRGGTRGAPRTPRTNHQYNRKQENVE