| New model in OGS2.0 | DPOGS201030 |
|---|---|
| Genomic Position | scaffold1486:+ 229-6912 |
| See gene structure | |
| CDS Length | 1428 |
| Paired RNAseq reads | 330 |
| Single RNAseq reads | 993 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009112 (9e-130) |
| Best Drosophila hit | Marcal1 (4e-87) |
| Best Human hit | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 (8e-72) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (4e-110) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (7e-108) |
| GeneOntology terms | GO:0004386 helicase activity GO:0005524 ATP binding GO:0016568 chromatin modification GO:0005634 nucleus GO:0003677 DNA binding |
| InterPro families | IPR001650 Helicase, C-terminal IPR014001 DEAD-like helicase IPR000330 SNF2-related |
| Orthology group | MCL11905 |
Nucleotide sequence:
AGAGAAACATGGCAAAACAAAATCAGCGAGCTTCTGCCATCGGTGCCGTTGGTAAACGTG
GCTACTCTGACAAGCAACAAAGATGTCAATTTCGTTTCCGATAGACAGGTCGAGGTTGTC
ATAGTTAGCTATAAGATAATAAGTCTGCACACGGAGCTGCTGAGGCAGAAGAGGTTTGGA
TTCGTCATAGTTGACGAGTCTCACCACCTGAAGTCACCCAAGGCTCAGTGTACGAGTGCC
CTGTTCAAGCTATGTGGCCAGGGTCGTGCAGTACTCCTTAGCGGGACCCCCGCCCTCAGT
CGACCCGTGGAACTCTACACCCAGCTGTCTCTACTAGAGCCGAGACTTTTCACTTACACG
GAATACGGTAAGAGATATTGCGACGCGAAACAAACAAACTTCGGTTGGGACATGACCGGC
AAGTCGAATTTGGCGGAGCTGCTCGTTATATTACAAAGGAGGTTCCTCATCCGCCGCACC
AAAGAACAGGTCCTCAATCTGGAAGAGAAGACTCGTGAGACTGTTATCTTGGACCAGTCG
CTGTTGAATTATTCTAAGGAGGACCAGCACGGGCTCACCCAAATGGCCGAGAAGTTCAGG
AACTCTAAATCATCAGAGAGACACGTCGCTATGATACAATACTTTAATGAATCAGCGGCC
ATAAAGACGCCGGCTGTGTGCAAGTACATCAGACAGTTACTGAGCGGCAGCCAGAAGTTC
CTGGTGTTCGCTCATCATAAGAATGTCATCGACTCCATCTGTGACACGCTGGATGAGCAA
CGCAAAAACTATATCAGAATCGTCGGATCTACCCCCACACACATACGAACGGAGCTCGTG
GACAAGTTCCAACACAGCGAGTCGTGTCGTTGCGCCGTGTTGTCCATCACCGCCGCTAAC
TCTGGCCTGACACTGACAGCAGCAGACCTCGTCATATTCGCTGAACTACACTGGAACCCC
GGCATTTTGATCCAGGCGGAGTCCCGTGCTCATCGCCTGGGTCGCGCAGGCTCCGTGTGT
GTGAGGTATCTTCTAGCGCGAGGAACAGCTGACGATCACATGTGGCCGCTGCTACAGACC
AAGCTTAATGTACTCAACGATGTGGGTCTGAGTGGAGACAATTTCGAAGACACGAAAATG
AAGCACCAGGACACCAAAAACAACATAACACATTACATGTCACCGGTGAGAAACAAAAAC
GACTACATACAAGGTACGAACATAAAGAAAATATCACAGGAACAAACGGAAAATGTAAAA
TCGCAGTCGGACTCTCAAACTACCCTCCACGGCATTAGCAAACTAACTTTACTGAGTCCA
GAGAAAAATAGTTCAGACTTGACCACTGACGGTGTAGACTCGGATGACAGGTTCTTGGAG
AACGACGAGGACGACGAGATCCTGGCCAGTATAGATCTGGATATGTAA
Protein sequence:
RETWQNKISELLPSVPLVNVATLTSNKDVNFVSDRQVEVVIVSYKIISLHTELLRQKRFG
FVIVDESHHLKSPKAQCTSALFKLCGQGRAVLLSGTPALSRPVELYTQLSLLEPRLFTYT
EYGKRYCDAKQTNFGWDMTGKSNLAELLVILQRRFLIRRTKEQVLNLEEKTRETVILDQS
LLNYSKEDQHGLTQMAEKFRNSKSSERHVAMIQYFNESAAIKTPAVCKYIRQLLSGSQKF
LVFAHHKNVIDSICDTLDEQRKNYIRIVGSTPTHIRTELVDKFQHSESCRCAVLSITAAN
SGLTLTAADLVIFAELHWNPGILIQAESRAHRLGRAGSVCVRYLLARGTADDHMWPLLQT
KLNVLNDVGLSGDNFEDTKMKHQDTKNNITHYMSPVRNKNDYIQGTNIKKISQEQTENVK
SQSDSQTTLHGISKLTLLSPEKNSSDLTTDGVDSDDRFLENDEDDEILASIDLDM