| New model in OGS2.0 | DPOGS200163 |
|---|---|
| Genomic Position | scaffold2269:- 12320-21595 |
| See gene structure | |
| CDS Length | 2196 |
| Paired RNAseq reads | 2573 |
| Single RNAseq reads | 6189 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002914 (0.0) |
| Best Drosophila hit | AP-1gamma, isoform E (0.0) |
| Best Human hit | AP-1 complex subunit gamma-1 isoform b (2e-173) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC012117 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC012117 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0030135 coated vesicle GO:0016183 synaptic vesicle coating GO:0008021 synaptic vesicle GO:0007269 neurotransmitter secretion GO:0006901 vesicle coating GO:0005515 protein binding GO:0044431 Golgi apparatus part GO:0030131 clathrin adaptor complex GO:0008565 protein transporter activity GO:0006886 intracellular protein transport GO:0016192 vesicle-mediated transport |
| InterPro families | IPR008152 Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain IPR011989 Armadillo-like helical IPR008153 Clathrin adaptor, gamma-adaptin, appendage IPR017107 Adaptor protein complex AP-1, gamma subunit IPR016024 Armadillo-type fold IPR013041 Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal |
| Orthology group | MCL10864 |
Nucleotide sequence:
ATGCTACAACATAAAATTAATTATCATCTAACCATCGCAATCGTTTCCAGCGACCTGAAC
AGCAATACACAATTCGTAGTGGGCCTGGCGCTGTGTACCCTGGGCGCGATCGCCTCGCCG
GAGATGGCAAGAGATCTGGCCTCGGAGGTGGAGAGGCTGATCAAGTCACCGAACGCCTAC
ATCAAGAAAAAGGCCGCGTTGTGCGCTTTCAGGATAATAAGAAGGGTGCCGGATCTCATG
GAGATGTTCCTGCCAGCTACTCGCAGCCTCCTCACGGAAAAGAATCACGGAGTCCTCATC
ACCGGAGTGACGCTCATCACCGAGATGTGCGAGAACAGCCCGGACACGCTAAACCACTTC
AAGAAGATCGTACCGAATCTGGTGAGGATATTGAAAAACCTGATACTGGCGGGGTATTCC
CCGGAGCATGACGTCAGCGGCGTGTCTGATCCATTCCTACAGGTCAAGATCCTCCGTCTG
CTGCGTATACTCGGCAAGAACGACGCCGAGGCTTCCGAAGCCATGAACGACATATTGGCG
CAAGTGGCTACGAACACGGAGACGAGCAAAAACGTCGGCAACACCATACTATACGAAACT
GTGCTCTCGATAATGGACATTAAGTCTGAGAGTAGTTTGCGGGTGCTGGCCGTCAATATA
CTGGGGAGGTTTCTACTCAATAACGATAAGAATATTCGCTACGTGGCCTTGAACACACTC
CTGAGGACCGTACACGTGGACACATCAGCCGTCCAAAGGCACAGGACCACTATATTGGAG
TGCTTGAAGGATCCGGACGTGTCTATTCGTCGCCGCGCCATGGAGTTATCGTTCGCCCTC
ATCAACAGTCAGAACATCCGGGCCATGATGAAGGAGTTGCTGTCGTTCCTGGAGCGCTCG
GACGCCGAGTTCAAGGCGCACTGTTCCAGCGCCATGGTGCTCGCCGCTGAGAAATACGCG
CCCTCCAGCAGGTGGCACCTGGACACGCTGTTCCAGGTGTTGCTAAAGGCCGGTAATTAT
CTCCGAGACGACACGGTGTCGAACACAATCCAGATAGTGTCGTCGGCGCCGAGCGAGCGC
CAGGCCTACGCCGCTATGAGGCTGTGGACTTCCCTGGAGCGCTCCGCGACCGCCGCCGAC
GCTACGGAGAGACAGCCGCTGGTTCAGGTTGCTGCGTGGACCATCGGCGAATATGGAGAT
ATGTTGGTCTCCGAAGCCAGTAACTCTATATCCATGGTGGATGACGACGGAGTCGACGAC
TTCAGCCGCCCGTCCGAAGAGTATGTCATCGATATATACCAGAAGCTGTTGTGGTCCACA
CAGCTGTCCATAACCACCAAGGAATATCTCCTGTTGTCGCTGGCCAAGCTGTCCACGAGA
TTCACCACACAACCGAGTCAGGATAAAATCCGTGTGATAATCGACACTTTCGGTTCACAC
ATTCACATCGAGTTGCAACAGAGAGGAGTGGAACTGTCTCAACTATACAAACAATACGCC
CACTTGCGGCCGGCGTTGTTGGAACGGATGCCGGCGATGGAGGCGAACGTTGTTAGAGAA
GACAATGATGAGGAGCTCGCGACGAACATACAGACACACGAACAACCCGCGCACGAACAG
GATGCGCTGCTAGACCTCATCATCGGTTCGGAGCCCCTGTCGAACGGCGACGTGGAACAC
CCGCCGCAAGTTACTGCGAACAATAACTCCAATACTAATGACATTCTGGATCTCCTCAGC
GGTCTGGACCTGTCCAGCAGTACACCGGTCACCGTCTCCAATAATAACGTATCGACGCCT
CCTTCGCTCTTACTAGACGGTTTGTTCTCTCCTCCGGCACCTACATCTCAAGAGACGGTG
GTGAAAGCGTTGGAGCGGGGCGGCGTGGTGGTGGAGCTGGTGGTCTGTGGTGGTGACGGC
AACGCGACCCTCACCATGAAAGCGAGGTCGCACCATCACACAACCATCACAGACTTCCTC
TTCCAGGCCGCTGTGCCCAGGACGTTCCGGTTGGACATGATGTCACCATCTGGGACGGTT
CTGACACCGCAGGGAGAAATCACTCAAGTCCTTAAAATCACCAATCCATCCAAGACACCG
CTACGTCTGAGAATAAGGGTGTCCTACACGATAGACGGCAACCCTATCTTGGAGCAGGCG
GAAGTGAACAGTTTCCCGCCTGATCTGTTCAACTGA
Protein sequence:
MLQHKINYHLTIAIVSSDLNSNTQFVVGLALCTLGAIASPEMARDLASEVERLIKSPNAY
IKKKAALCAFRIIRRVPDLMEMFLPATRSLLTEKNHGVLITGVTLITEMCENSPDTLNHF
KKIVPNLVRILKNLILAGYSPEHDVSGVSDPFLQVKILRLLRILGKNDAEASEAMNDILA
QVATNTETSKNVGNTILYETVLSIMDIKSESSLRVLAVNILGRFLLNNDKNIRYVALNTL
LRTVHVDTSAVQRHRTTILECLKDPDVSIRRRAMELSFALINSQNIRAMMKELLSFLERS
DAEFKAHCSSAMVLAAEKYAPSSRWHLDTLFQVLLKAGNYLRDDTVSNTIQIVSSAPSER
QAYAAMRLWTSLERSATAADATERQPLVQVAAWTIGEYGDMLVSEASNSISMVDDDGVDD
FSRPSEEYVIDIYQKLLWSTQLSITTKEYLLLSLAKLSTRFTTQPSQDKIRVIIDTFGSH
IHIELQQRGVELSQLYKQYAHLRPALLERMPAMEANVVREDNDEELATNIQTHEQPAHEQ
DALLDLIIGSEPLSNGDVEHPPQVTANNNSNTNDILDLLSGLDLSSSTPVTVSNNNVSTP
PSLLLDGLFSPPAPTSQETVVKALERGGVVVELVVCGGDGNATLTMKARSHHHTTITDFL
FQAAVPRTFRLDMMSPSGTVLTPQGEITQVLKITNPSKTPLRLRIRVSYTIDGNPILEQA
EVNSFPPDLFN