| New model in OGS2.0 | DPOGS205498 |
|---|---|
| Genomic Position | scaffold12128:+ 3811-5201 |
| See gene structure | |
| CDS Length | 609 |
| Paired RNAseq reads | 2339 |
| Single RNAseq reads | 31769 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000129 (3e-56) |
| Best Drosophila hit | twinstar (2e-65) |
| Best Human hit | ND |
| Best NR hit (blastp) | actin-depolymerizing factor 1 [Bombyx mori] (3e-74) |
| Best NR hit (blastx) | actin-depolymerizing factor 1 [Bombyx mori] (1e-72) |
| GeneOntology terms | GO:0003779 actin binding GO:0030042 actin filament depolymerization GO:0008585 female gonad development GO:0007298 border follicle cell migration GO:0007015 actin filament organization GO:0000910 cytokinesis GO:0000915 cytokinesis, actomyosin contractile ring assembly GO:0030041 actin filament polymerization GO:0007409 axonogenesis GO:0016319 mushroom body development GO:0001736 establishment of planar polarity GO:0042067 establishment of ommatidial planar polarity GO:0001737 establishment of imaginal disc-derived wing hair orientation GO:0035286 leg segmentation GO:0010591 regulation of lamellipodium assembly GO:0048749 compound eye development GO:0005875 microtubule associated complex |
| InterPro families | IPR002108 Actin-binding, cofilin/tropomyosin type |
| Orthology group | ND |
Nucleotide sequence:
ATGTTGCGCGCACGTAACTATCATACCATCAACACATATAAATATCCTGTATTAACATTC
CAGGCGTCTGGGGTGACAGTATCGGACGCTTGCAAGACTACGTACGAGGAAATCAAAAAG
GATAAGAAGCATAGATACGTAGTTTTCTACATCAGGGATGAGAAACAGATAGATGTTGAG
ACGGTGGGGGGTAGGAACGCCGAGTACGAGCAGTTCCTAGAGGACCTGCAGAAGGGAGGC
ACCGGGGAGTGCAGATATGGTCTGTTTGATTTTGAGTATACGCATCAGTGTCAAGGCACA
TCGGAGGCCAGTAAGAAGCAGAAACTGTTTTTGATGTCATGGTGCCCCGATACAGCCAAG
GTTAAGAAGAAGATGTTGTACTCTAGGACAGCCTCTCCCAAAGCGATAACGCGCTGGAAT
GGGCCCCCCAGGCCTAAAGGGGGTCGTAAGAGACCTAGAAAAAATGGGGCGTTGGGTAGA
GTCCTGGGCTCATTCGACGCTTTAAAGAAGTCGTTGGTCGGTGTGCAGAAGTACATCCAG
GCGACTGATCTGTCCGAAGCATCACAGGAGGCCGTCGAAGAGAAGCTGCGCGCCACCGAC
CGCCAGTAG
Protein sequence:
MLRARNYHTINTYKYPVLTFQASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVE
TVGGRNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAK
VKKKMLYSRTASPKAITRWNGPPRPKGGRKRPRKNGALGRVLGSFDALKKSLVGVQKYIQ
ATDLSEASQEAVEEKLRATDRQ