New model in OGS2.0 | DPOGS202217  |
---|---|
Genomic Position | scaffold121:+ 21652-23287 |
See gene structure | |
CDS Length | 1125 |
Paired RNAseq reads   | 516 |
Single RNAseq reads   | 1616 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013510 (2e-170) |
Best Drosophila hit   | ribonucleoside diphosphate reductase small subunit (4e-148) |
Best Human hit | ribonucleoside-diphosphate reductase subunit M2 isoform 2 (4e-137) |
Best NR hit (blastp)   | ribonucleoside-diphosphate reductase small chain [Culex quinquefasciatus] (1e-170) |
Best NR hit (blastx)   | ribonucleoside-diphosphate reductase small chain [Culex quinquefasciatus] (1e-158) |
GeneOntology terms    | GO:0005971 ribonucleoside-diphosphate reductase complex GO:0004748 ribonucleoside-diphosphate reductase activity GO:0006260 DNA replication GO:0009186 deoxyribonucleoside diphosphate metabolic process GO:0055114 oxidation reduction GO:0046914 transition metal ion binding GO:0006919 activation of caspase activity |
InterPro families    | IPR012348 Ribonucleotide reductase-related IPR000358 Ribonucleotide reductase IPR009078 Ferritin/ribonucleotide reductase-like |
Orthology group | MCL14975 |
Nucleotide sequence:
ATGTCTTACTGTAATGATCAAGAAAATGTGTTTAATGGATTAAACAATGTTCATATCAAG
AGTCCTGTTAAAAAAATCCTTAATTCCCGAGATGAAAATATTCAATTTGAAAAAATGGAA
GTTGAGAAAGACAGCAAAACGCCGGCTTTTGACCCACAATTAGAACCCCTGCTGAGAGAA
AACCCTCGTCGATTTGTTATATTCCCCATCCAGTATCCTGATATATGGCAAATGTACAAG
AAGGCAGAGGCTTCTTTCTGGACTGTTGAAGAAGTTGACTTATCTAAGGATTTGAGTGAT
TGGGAAAGTTTAAAGGACTGTGAAAGACACTTTATTAAGCATGTATTGGCGTTTTTTGCG
GCATCAGATGGTATAGTAAATGAGAATCTCGTAGAACGCTTCTCCCAGGAAGTTCAGGTG
ACTGAGGCGAGATGCTTCTATGGTTTCCAGATTGCTATGGAAAATGTTCACTCGGAAATG
TATTCACTTCTGATTGATACATATATTAGGGACCCTAAAGAAAGGGATTTCCTGTTCAAT
GCTATTGAGACTTTACCCTGTGTAAAGAAGAAGGCAGATTGGGCCCTTCAGTGGATTGCC
AGTAAGACGGCCACATTTGGAGAGCGCATTGTTGCATTTGCTGCTGTTGAAGGGATTTTC
TTCTCTGGTAGTTTTGCTTCTATCTTCTGGATGAAGAAGAGAGGTCTCATGCCCGGTTTG
ACTTTCAGTAATGAACTCATTTCTAGAGATGAAGGCCTTCACACAGATTTCGCATGTCTT
ATGTTCAAACACTTGGTGCAGAAGCCAAGCAAAGATTGTGTTTTAAAAATTATTAAGGAT
GCTGTAGTCATTGAACAGGAGTTCCTCACTGATGCACTGCCTGTGAGACTTCTTGGTATG
AACTGTGAGCTGATGTCAGATTACATTGAATTTGTTGCTGACCGTCTTCTCATGGAATTG
ATAGGAGAGAAGCACTACAACACAAAGAATCCTTTTGACTTCATGAACTTAATTTCCCTG
GAGGGTAAGACGAACTTCTTTGAGAAGAAGGTCGGGGAGTACCAGAAGTGGGGAGTGATG
GCAAATCCTGATGACAACGTGTTCACTTTAGATGCTGAGTTTTAA
Protein sequence:
MSYCNDQENVFNGLNNVHIKSPVKKILNSRDENIQFEKMEVEKDSKTPAFDPQLEPLLRE
NPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWESLKDCERHFIKHVLAFFA
ASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFN
AIETLPCVKKKADWALQWIASKTATFGERIVAFAAVEGIFFSGSFASIFWMKKRGLMPGL
TFSNELISRDEGLHTDFACLMFKHLVQKPSKDCVLKIIKDAVVIEQEFLTDALPVRLLGM
NCELMSDYIEFVADRLLMELIGEKHYNTKNPFDFMNLISLEGKTNFFEKKVGEYQKWGVM
ANPDDNVFTLDAEF