| New model in OGS2.0 | DPOGS212876 |
|---|---|
| Genomic Position | scaffold238:- 229508-234585 |
| See gene structure | |
| CDS Length | 1713 |
| Paired RNAseq reads | 177 |
| Single RNAseq reads | 382 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000820 (6e-66) |
| Best Drosophila hit | CG3121 (3e-45) |
| Best Human hit | radial spoke head protein 4 homolog A isoform 1 (6e-72) |
| Best NR hit (blastp) | PREDICTED: similar to radial spokehead-like 3 [Apis mellifera] (1e-102) |
| Best NR hit (blastx) | PREDICTED: similar to radial spokehead-like 3 [Apis mellifera] (1e-102) |
| GeneOntology terms | GO:0003341 cilium movement GO:0035083 cilium axoneme assembly |
| InterPro families | IPR006802 Radial spokehead-like protein |
| Orthology group | MCL11894 |
Nucleotide sequence:
ATGTCTAAGACATATATGTGCGAGCCTGATATCATAGCGGCGAATGAGAATGTCATGCCG
GACTTGAACAATGATTTGGTTATGGCCAAAAATTTTTTAAAGCAACAGTGCGCTGCGACC
GGGGATACATTGTATGATCATCTAGTGGATGTGGTGCATAAAATTATATCACAGAAGCCT
CCAGATGTGGTGGACAGCTTTGAGCAGTACTCTTGGCAAGTCAAGCAAGAGAAATTTCGA
CCAAACTTCGATTTGCTCAACGACATTTACTTGTCGCCTCCACAGCTTGCTATAGTCCGA
CGAGTTGATGAAATGTTTAGGTTAGTGGCCAGCAAGTCCCAGAGGCTGGAAGATTTAGGT
GAGGAAGAACAGGAGCTTGATCTCGAGGAAGAATCATTCAAACCCAGGATCGCGGATCTC
ATAGATCACAACTACTACTTTAGAGAGGGAGGATATGGATTACCTGACAGCGAATGCTAC
GCTGTTTACATCGCCCTTAACATGCTGGCAATCAAAGAACCAGTGGCTACTGTTAGATTT
TTTGGCAAGATTTTTGGTACTAAAGCAAATTATTACGTCGCCGAAGTTGACCTTACTATT
GAAGAGTTGGATAGGAGGATAAGGGAATTTGAAATGAGAGACATGCCTGGAGAAGGTGAG
GGTCTGGAGGAGGATAAGGCACAGGAGCTAGAGGAACAAAAAGAAATGGTTGGTGAGGGC
GAAGGGAAGGAAGAGAAACCAAAAGAACCGGTTCCTCCTAAACTACCGGAAATTCCTGTG
TCCACGTTTCAGCCACCGCCACCGATACCCGTTGAGAGACCTGGCCAAGGGGTTAATAAA
AAGGTCTTTTACGTGTGCAGTCAACCTGGAGAACCCTGGATCTGTCTCCCGGACGTCACT
CCAGATCAGATACGTGTTGCAAGACTCACTGTGAGGTGTATGACTGGAGATTTAGATGCT
GAAGTGTTAACCTTCCCACCGTTTGAAGGCACGGAGCGGAACTACCTTCGAGCACAACTG
GCGCGGATACAAGCCGCGACCTCTATATCACCGCAAGGATTCTACACATACGGGTCAGGG
GAAGAGGAGGATATCGACCTGGAGGAAGGAGCTGGTGATATGGCTTTCAATCCAAATCCA
TTCTACCAAGGACATACACTGAAGGATCTCATCGACCCCAATCTTACGTACTGGGTCCAC
CACGGGAGGTACATCCTCAAACAAGGGCGGACTATCTGGTGGAACCCTAACGCGGGGATG
GAAGAAGGTCTGGAGGAAGAGGATGATGAGGGTCCTCCGCCCTTGACACCGGAGTCAGGG
CCTTCACTGTTCAGTCCTCTGGCGGACGACGCGCGGCTGGAGGGCGGCGTAGCGTGGACT
CCACGGAGCAGTACCACGCTGATACCAGACAGGTCGATCGCCGTACTCAGGAGCAACGTA
TGGCCAGGAGCTGTGGCTTACTCGAATGTCGGAAAGAAGTCCGAGTGTATGTATGTGGGC
TGGGGTCTGAAGGCACAGCCTCCTAACTTCTCTCCGCTCCAACTCCCGCGACCGCAGGAC
GAGTACGTCATAGGCCCAGAGGTCATGGAGATGGCTGATCCTACATTTGCAGATGAAGAG
GCGTATCGTATCGCCCACTTGCCTCCTCCCCCTCCGCCAGAACTACCGGGAGAGGGGGAG
GGATTCCCCGAGGAAGAGGAGGAAGAAGATTAG
Protein sequence:
MSKTYMCEPDIIAANENVMPDLNNDLVMAKNFLKQQCAATGDTLYDHLVDVVHKIISQKP
PDVVDSFEQYSWQVKQEKFRPNFDLLNDIYLSPPQLAIVRRVDEMFRLVASKSQRLEDLG
EEEQELDLEEESFKPRIADLIDHNYYFREGGYGLPDSECYAVYIALNMLAIKEPVATVRF
FGKIFGTKANYYVAEVDLTIEELDRRIREFEMRDMPGEGEGLEEDKAQELEEQKEMVGEG
EGKEEKPKEPVPPKLPEIPVSTFQPPPPIPVERPGQGVNKKVFYVCSQPGEPWICLPDVT
PDQIRVARLTVRCMTGDLDAEVLTFPPFEGTERNYLRAQLARIQAATSISPQGFYTYGSG
EEEDIDLEEGAGDMAFNPNPFYQGHTLKDLIDPNLTYWVHHGRYILKQGRTIWWNPNAGM
EEGLEEEDDEGPPPLTPESGPSLFSPLADDARLEGGVAWTPRSSTTLIPDRSIAVLRSNV
WPGAVAYSNVGKKSECMYVGWGLKAQPPNFSPLQLPRPQDEYVIGPEVMEMADPTFADEE
AYRIAHLPPPPPPELPGEGEGFPEEEEEED