| New model in OGS2.0 | DPOGS201735 |
|---|---|
| Genomic Position | scaffold1591:+ 18543-26477 |
| See gene structure | |
| CDS Length | 1515 |
| Paired RNAseq reads | 3616 |
| Single RNAseq reads | 10561 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001353 (3e-65) |
| Best Drosophila hit | ergic53, isoform A (5e-145) |
| Best Human hit | protein ERGIC-53 precursor (2e-89) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP005404-PA [Tribolium castaneum] (4e-173) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP005404-PA [Tribolium castaneum] (4e-154) |
| GeneOntology terms | GO:0005537 mannose binding GO:0016020 membrane |
| InterPro families | IPR005052 Legume-like lectin IPR008985 Concanavalin A-like lectin/glucanase IPR013320 Concanavalin A-like lectin/glucanase, subgroup |
| Orthology group | MCL12818 |
Nucleotide sequence:
ATGTCGTCGTATAGTTTAAATTTATTATTGTTGACGGTGTTTGGTATATTTGTGACTTCG
AACACCCAGACGATACATAAACGATTTGAATACAAATATTCGTTCAAACCGCCTTATTTA
GCACAAAAAGATGGTTCTGTGCCGTTTTGGGAGTACGGAGGCAATGCGATCGCGTCTGGT
GAGAGCGTCCGGTTGGCGCCGTCTCTGAGGAGTCAGAAGGGCGCTATATGGTCCAAGCAT
CCGATCAACTTCGACTGGTGGGAAGTGGACATCATGTTCAAGGTCACCGGCAGGGGAAGG
ATAGGAGCCGACGGGCTGGCCTTCTGGTACGTGACGAAGCGCGGGGAGTACACCGGCGAG
GTGTTCGGCTCCTCGGACCGCTGGAACGGTCTGGGGATCATCTTCGACTCCTTCGATAAC
GACAACAAACACAACAACCCTTACATCATGGCGGTCCTGAACGACGGCACTAAGAGCTTC
GACCACAAGAGCGATGGTTCCAGCCAGCTGTTATCCGGCTGCTTGCGGGACTTCAGGAAC
AAGCCCTTCCCGACCCGCGCCCGGATAGAATACTACGCGAACACACTCACAGTCTACTTC
CATAACGGTCTAACCAACAACGAGGCGGACTATGACTTGTGTTTCCGAGCTGAGAATGTC
CAGTTGCCTCGTGGAGGGTTCCTGGGCGTCTCCGCAGCCACCGGCGGGCTGGCGGACGAC
CATGACGTCATACACCTGCTGACGTCATCGCTGCACTCCACACAGCAGGGAGGACAGCAA
ATAAACAGTGCAGAGCAAGCCAAGCTGTCCCAGGAGTACCAGGAGTACCAGAAGAAGCTG
GAGCAGCAGAAAGAGGATTACAGGAAGGAACATCCCGATGAGGTCCGAGACAAGGACGGT
GAGTTTGATGACTGGTTTGAGTCTGATGGACAACGGGAGCTCAGACAGATCTTCGCCAGC
GTTGGGCATGTGCAGGACGGGGTCAGGGAACTCAGCAAGAAGATGGACGAGGTTATTGGC
AAACAGACAAACTCGCTGTCCATGTTGTCAGCCGTGTACAGTCAGACACAGACGATGCAG
GTCCAGCAGCCTGGACAAGCTGGCCAACCACCTGTACAGCAGATGCCGATGCTGCCCATC
ACCAGACACGACTGGGACCAGCTGATGGCCAACAACCAGCTCGTCATCAACACCATCGCC
GAGCTCAAGGGTTTCATAATAGACGTGTCGCGTAAGACGGACAGCGTGGTGGGCGGCGTG
GCGGGCGGCGCGGCGGGCGGCGCTCTAAACCAACAGGTGGTGAACGAACTGAGGGAGGGG
ATCAATCATGTTAAAAACAATGTGGCGGGAGTCGCACAGAGGCTGTCGTCCGCTCCGCCG
CAGCCCGCGTGTCCGTCTGTGTCGTGTGTGTCCACCACCATGCTGCTGACGGTAGTGGCG
TCGCAGCTGGCCGTCATGTTCCTGTATTCGTTGTACAAAGAAAGGAAAGAGGCGCAGGCT
AAGAAATTCTTCTGA
Protein sequence:
MSSYSLNLLLLTVFGIFVTSNTQTIHKRFEYKYSFKPPYLAQKDGSVPFWEYGGNAIASG
ESVRLAPSLRSQKGAIWSKHPINFDWWEVDIMFKVTGRGRIGADGLAFWYVTKRGEYTGE
VFGSSDRWNGLGIIFDSFDNDNKHNNPYIMAVLNDGTKSFDHKSDGSSQLLSGCLRDFRN
KPFPTRARIEYYANTLTVYFHNGLTNNEADYDLCFRAENVQLPRGGFLGVSAATGGLADD
HDVIHLLTSSLHSTQQGGQQINSAEQAKLSQEYQEYQKKLEQQKEDYRKEHPDEVRDKDG
EFDDWFESDGQRELRQIFASVGHVQDGVRELSKKMDEVIGKQTNSLSMLSAVYSQTQTMQ
VQQPGQAGQPPVQQMPMLPITRHDWDQLMANNQLVINTIAELKGFIIDVSRKTDSVVGGV
AGGAAGGALNQQVVNELREGINHVKNNVAGVAQRLSSAPPQPACPSVSCVSTTMLLTVVA
SQLAVMFLYSLYKERKEAQAKKFF