| New model in OGS2.0 | DPOGS210182 |
|---|---|
| Genomic Position | scaffold5203:- 4060-9858 |
| See gene structure | |
| CDS Length | 2532 |
| Paired RNAseq reads | 210 |
| Single RNAseq reads | 554 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014150 (0.0) |
| Best Drosophila hit | CG5414 (0.0) |
| Best Human hit | isoleucyl-tRNA synthetase, mitochondrial precursor (1e-163) |
| Best NR hit (blastp) | PREDICTED: similar to CG5414 CG5414-PA [Acyrthosiphon pisum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG5414 CG5414-PA [Acyrthosiphon pisum] (0.0) |
| GeneOntology terms | GO:0004822 isoleucine-tRNA ligase activity GO:0005737 cytoplasm GO:0006428 isoleucyl-tRNA aminoacylation GO:0005524 ATP binding GO:0008270 zinc ion binding |
| InterPro families | IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing domain IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding IPR023585 Isoleucyl-tRNA synthetase, type 1 IPR002301 Isoleucyl-tRNA synthetase IPR002300 Aminoacyl-tRNA synthetase, class Ia IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding IPR014729 Rossmann-like alpha/beta/alpha sandwich fold |
| Orthology group | MCL14744 |
Nucleotide sequence:
ATGGGGCATGCTGTTAACAAGATCATTAAGGATATAAACAACAGAAGTCAGATTCTTCAA
GGCAATAAGGTCCATTATGTACCAGGCTGGGACTGCCATGGACTTCCAATAGAGTTTAAA
GCTCTCCAGAAAACAAAAAGCAAAAATGAACCCACCGATCCAGTACAAACAAGACAAATA
GCAAGAAGTTTTGCACTCGAAACAGTTAAGAGCCAAAAAGAAGCATTCGAAAGCTGGGGT
ATAATGGCCGATTGGGAAAAACAATGTTATTTAACACTCGATAAAAACTATGTCCAGAGC
CAGCTGAGATTGTTCTATAAAATGTACAAATCTGGCTTAATTTACCAAGCCCTTAAACCG
GTTTATTGGTCACCATCTTCAAGGACAGCATTAGCTGAAGCGGAATTGGAATATGATCCT
AACTTTAAAAGCAAAGAGGTTTATTTTAAATTTCCCATGGAGAAAGTTCCTGATTTGGTA
AAAAATGTCTGTTCTGACCAACAAATATTTGCCCTCATCTGGACAACAACTCCTTGGACA
TTGGTTGCTAACAAAGCGATAGCTTACAACCCCAGCATGGTGTACTGTGTCGCCAAAATG
AGTAAAAGATCTGAGCTATTCCTTATTGCTAAAGATCAGATTCAAGAGCTAGAGAGAGTA
TTGGACTGTGGAATATCCATTGTGGTGGAGTTTGAGGGTCAACATTTATCATCCACAACT
TATAACGGTCTGTCACACACTATGCCGCTAATACCAGGACCACACGTGACCAGTGGCAAG
GGCACCGGCTTAGTTCATACAGCACCCGCACATGGACCGGATGACTTTGTCGTTGCTCTC
AATAATAATATTACTGTGGAGTGCAATGTGGACGAACACGGCCGCTATATAAACCTCGGT
CCCGATTTGGACGGGCTATACGTGCTGCAGGAAGGCCAGGAAACTGTGATGAAGAAGCTT
CGAGACTCGATTATATATGAGGGTATATTCACCCATTCCTATCCATTGGATTGGAGAACT
AAAAAACCGGTTATCCTAAGAGCCAGCCATCAGTGGTTCATAGACACGAACGCGTTGAAA
CAAACGGCCCTGGGAGCTCTAGATAAAGTGGCTATCCTACCACCATCCACGGCGGACCAG
TCTAGACAGGGCTTCCGCGCTCAATTGGAGAAGAGGCCCTACTGGTGTATATCGAGACAG
AGAGCCTGGGGCGTGCCCATACCTGCTCTATATAGGGGTAACGAGATCATTGTTGATGAG
GAAATCATAGAGAATATCTGTTCTCTCATAGACAAGGACGGCACAGACGTTTGGTGGACT
TGCGATGTGAAGGATCTCATACCGAAGAAGATTTCTGAGAAATTTAATTGTGAAGAAATT
ACCAAAGGAAAGGATATAATGGACATCTGGCTGGACTCTGGTCTTTCCTGGCACACCCTG
GATCGTAAGGCTCACCTGTATTCTGAAGGTGTTGACCAACTCACCGGTTGGTTCCAAGCT
TCCTTGCTAACATCTCTCGCTCTGAATGGTGAAGCGCCTTACGAATCTATATTCGTACAC
GGCTTCGTAGTTGACGACAAGAAACGTAAAATGTCTAAATCCATAGGCAATGTCATTGAC
CCGAAAACCATAATATTCGGTGACAAGAAGAACGCCGCTTACGGTGTCGACACCTTGAGG
TGGTGGGTCGCGAGTCACTCCACTCAACATTCCCAAATAGTCATCAGCAAGAAACTTCTA
GAGGACTGTCAGAACGAAGTGATAAGGATACGAAACATAATGAAATACCTGCTCGGCGTG
ATCAGCGATTTAGAGAAGACGGATTTCTACAAGAATCCAACATTAAATTTCTTCGACCGA
TACATGGTCACGGAATGTCATAGTTTTGTGAACGAAACTAATCACCATTACGATAATTTT
AGATACAATCATGTGGCGCAGAATGTATTATATTTTATAAGTAATAAGGTGTCCGGGTTG
TATTGTCACTGTATTAAAGACAGGTTGTACTGTTCAATGAGAAATTCTAAAGAGAGACTC
GCCGCTCAGCTTGTGATACATACGATTCTGGTCTCTCTGTGTAAGGGTTTAGGGCCAATT
TTGCCTCATCTGATCGAAGAAGTGTGGCAGTATCATCCGTTGTATGATGAACCGTTTTAT
TTCACCAAAGATCTGCCAGTCTTGAAGCCGTCTGATGTTGATTCGTCGTTAATGGAGGCC
ATATTGGATATCAAAAGAAACGTTATACTAAAAACTAAAAATGAACATTTGAAGAAATTC
GAACTAAATTTAACAATAAATTCAGAGTTATATAATAAATTAGATGATTTAAACCACACA
GATGGCATCAACGATAGTGTGTTATGTGAAATTCTAGAACTGTCATCTGTCAGATTGAAT
AATGGCGGGGAAAATATGCTAGTAGATTTGACACAGAGTAAAAAAGATCAATGTTTGAGA
TGCAGGAAATATAATGCGATAGATAATAGTGACAAGTGTTTGAGATGTGAAAAAGTTTTA
GCTATGTATTGA
Protein sequence:
MGHAVNKIIKDINNRSQILQGNKVHYVPGWDCHGLPIEFKALQKTKSKNEPTDPVQTRQI
ARSFALETVKSQKEAFESWGIMADWEKQCYLTLDKNYVQSQLRLFYKMYKSGLIYQALKP
VYWSPSSRTALAEAELEYDPNFKSKEVYFKFPMEKVPDLVKNVCSDQQIFALIWTTTPWT
LVANKAIAYNPSMVYCVAKMSKRSELFLIAKDQIQELERVLDCGISIVVEFEGQHLSSTT
YNGLSHTMPLIPGPHVTSGKGTGLVHTAPAHGPDDFVVALNNNITVECNVDEHGRYINLG
PDLDGLYVLQEGQETVMKKLRDSIIYEGIFTHSYPLDWRTKKPVILRASHQWFIDTNALK
QTALGALDKVAILPPSTADQSRQGFRAQLEKRPYWCISRQRAWGVPIPALYRGNEIIVDE
EIIENICSLIDKDGTDVWWTCDVKDLIPKKISEKFNCEEITKGKDIMDIWLDSGLSWHTL
DRKAHLYSEGVDQLTGWFQASLLTSLALNGEAPYESIFVHGFVVDDKKRKMSKSIGNVID
PKTIIFGDKKNAAYGVDTLRWWVASHSTQHSQIVISKKLLEDCQNEVIRIRNIMKYLLGV
ISDLEKTDFYKNPTLNFFDRYMVTECHSFVNETNHHYDNFRYNHVAQNVLYFISNKVSGL
YCHCIKDRLYCSMRNSKERLAAQLVIHTILVSLCKGLGPILPHLIEEVWQYHPLYDEPFY
FTKDLPVLKPSDVDSSLMEAILDIKRNVILKTKNEHLKKFELNLTINSELYNKLDDLNHT
DGINDSVLCEILELSSVRLNNGGENMLVDLTQSKKDQCLRCRKYNAIDNSDKCLRCEKVL
AMY