New model in OGS2.0 | DPOGS204705  |
---|---|
Genomic Position | scaffold6624:+ 3689-6756 |
See gene structure | |
CDS Length | 561 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 6 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase [Bombyx mori] (4e-29) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase [Bombyx mori] (5e-28) |
GeneOntology terms    | GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10020 |
Nucleotide sequence:
ATGGACATCCGCTACATAAATTTTGCGGATGCGTTGCCAACCTTGATTTTTGAGGAAAAA
GGAAGGGGTGGGAATAAGAAAATTGGAGGAAAGGGAGGGTATGGGGAAAGGGCAACCGGC
TCTCTCACTAATCGGACGAAACGCAGCCATAAAGGCTACTTCATGCCGATCTTCTGTGAG
AGGGTGTTACTTCCCCGGTCGAGCCAGCCTATGTTCCAGCTGCAGCCCATCAGTCTTACG
ACGTGTCTCTATAAAGTGTTTGCAATGACTCTACTTCGACGTCTTGCCTATATCTTAGAT
GAACACCAGCCAGTAGAGCAAGCTGGTTTTGTAAAGGGCTTTTCGACGACTGAACACATC
CACACTTTGAAACTTATCATTGAAAGATACAACGAGTACGACCTTCCACTCTACATTTGC
TTTATTCATTATAGTAAAGCCTTTGACTTTATATCCCAGAGTGCAATTTGGCGAGCTCTA
TCAAGGCAAGGGGTAAGCAATGATTATATCAATATATTGATGGAGATTTACAATAAGAGT
GAAGCACATCCACATGCATAA
Protein sequence:
MDIRYINFADALPTLIFEEKGRGGNKKIGGKGGYGERATGSLTNRTKRSHKGYFMPIFCE
RVLLPRSSQPMFQLQPISLTTCLYKVFAMTLLRRLAYILDEHQPVEQAGFVKGFSTTEHI
HTLKLIIERYNEYDLPLYICFIHYSKAFDFISQSAIWRALSRQGVSNDYINILMEIYNKS
EAHPHA