| New model in OGS2.0 | DPOGS207233 |
|---|---|
| Genomic Position | scaffold423:- 17318-20409 |
| See gene structure | |
| CDS Length | 1521 |
| Paired RNAseq reads | 40 |
| Single RNAseq reads | 106 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008589 (0.0) |
| Best Drosophila hit | connectin (5e-53) |
| Best Human hit | leucine-rich repeat transmembrane neuronal protein 2 precursor (3e-19) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (1e-83) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (4e-85) |
| GeneOntology terms | GO:0007155 cell adhesion GO:0005886 plasma membrane GO:0016200 synaptic target attraction GO:0007413 axonal fasciculation GO:0007156 homophilic cell adhesion |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL11975 |
Nucleotide sequence:
ATGGACTTTAAATACCTAATCCTGATGATTGCTTTCGCAACGGTTGAGATAAACTTGACG
GAGAGTCGTCAAAATGATAAACGAAGATGGAAATCAGAAAAAACTCTCTACTCTCATTAC
GTGAACATTTGTGATATACAAGATCGAGTGTCCAAAGTACATTGTTACTGCGAGAGCATT
AAAATTAAAACTGCCACTAAAGCCGACTGCTGGGTTTTTAATGGCGGCATTGCCGAAGAT
GACCCATTTTGGTCCAACTTTTACTCGCAACCTAAAATAGAAAGGCTTACATTTAATGTA
CGGGCAGATGGAGGACTCACCTATATACCAGCGAAAGTTATTGTACGACTCGATAGACTA
TACTATCTTAATATTCAATATGCAAATATTTTCAGTATACCGTCATTTGCGTTTACCAAT
TCTTCAACATTGAGAGAAATATCGTTACCAAAGAACAAAATTGCCAAACTCGAGAAAATG
TCTTTTGCCCATTTAATAATGCTTGCTAACGTTAGCCTGACCGAGAATCAAATATCTGAA
TTGCATAGAGATGTATTTTATGTGCTGCCGAATTTACAAAGGCTTCATCTATCCAAGAAC
ACATTAAGTGTCCTTCATGACGGATGCTTTAAGCATTTGAATAATTTAATCAAATTGGAT
TTGAACAGCAATCTGTTGACAGTTGTGATAAGGGAGAATTTCTTAGGGTTATCCAATTTG
ATTACACTAGACGTGAGATATAATAAATTAATGATGATAGGTGATTTGGCGTTTGCAGAA
CTTTGGAGCCTTCAAGAACTTTATTTAGATGGAAACGAAATAGAATTTATATCAGAAAGA
GGTTTTGGCGGATTGACTCAGCTGAAAAAACTTTCTTTAGCTGATAATAAGTTAGCTGTT
TTGGACGACGGAGTATTCGATGACGTAAAAAAGTTGAATGTTCTGGATTTAAGAAACAAC
AACTTGGAAACATTGAAACAAGAAACTCTACGAAGTCTTGTAGAAAATATGAAAACAAAT
TACGCACTAATATCTCTCGATGGTAATAAGTTCACATGTGATTGTCGACTGTCGTGGTTG
TATCAGCTCCGGAACGAAACAAGAAGCAAGCGGGTACGAGCGTCTCTAATCAGACTGAAT
TGCCTAATGGACACTAAACTTAAAGCAAACTTAGGTAACATAAAGATCCAGAAATCTGAA
ACATCTCTCAGGGTAAACAGTGGCGCTTATAAAGTTGAAAAAACAGACGATGATGAGGAC
GATTTTGATGAAGATCAAGTTTATGAAGACGCTATGCAGGACCAGGAGAACGGTTTAGAT
TCACTTAAGATAGAATATCGCAGGAAGCTAATGGAAATTCCAGTTGACATGCTCCCTTGT
GCTAGCAAACTTAGCTATGAGGCTTCCTACTCGCCGCCGACGCAAGACGAAGTCAAATAT
TATAAAACTTCAGGATGCGAAAAGCGCTCCCTCTCCATCTTTATTTTGATATTATTATGC
ACTCTAGTAAATATAATGTAG
Protein sequence:
MDFKYLILMIAFATVEINLTESRQNDKRRWKSEKTLYSHYVNICDIQDRVSKVHCYCESI
KIKTATKADCWVFNGGIAEDDPFWSNFYSQPKIERLTFNVRADGGLTYIPAKVIVRLDRL
YYLNIQYANIFSIPSFAFTNSSTLREISLPKNKIAKLEKMSFAHLIMLANVSLTENQISE
LHRDVFYVLPNLQRLHLSKNTLSVLHDGCFKHLNNLIKLDLNSNLLTVVIRENFLGLSNL
ITLDVRYNKLMMIGDLAFAELWSLQELYLDGNEIEFISERGFGGLTQLKKLSLADNKLAV
LDDGVFDDVKKLNVLDLRNNNLETLKQETLRSLVENMKTNYALISLDGNKFTCDCRLSWL
YQLRNETRSKRVRASLIRLNCLMDTKLKANLGNIKIQKSETSLRVNSGAYKVEKTDDDED
DFDEDQVYEDAMQDQENGLDSLKIEYRRKLMEIPVDMLPCASKLSYEASYSPPTQDEVKY
YKTSGCEKRSLSIFILILLCTLVNIM