New model in OGS2.0 | DPOGS216207  |
---|---|
Genomic Position | scaffold5622:- 676-1086 |
See gene structure | |
CDS Length | 411 |
Paired RNAseq reads   | 110 |
Single RNAseq reads   | 2170 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004541 (4e-36) |
Best Drosophila hit   | lethal (2) essential for life, isoform B (4e-12) |
Best Human hit | heat shock protein beta-2 (4e-08) |
Best NR hit (blastp)   | 19.8 kDa small heat shock protein [Choristoneura fumiferana] (5e-50) |
Best NR hit (blastx)   | 19.8 kDa small heat shock protein [Choristoneura fumiferana] (1e-39) |
GeneOntology terms    | GO:0009790 embryo development GO:0009408 response to heat |
InterPro families    | IPR002068 Heat shock protein Hsp20 IPR008978 HSP20-like chaperone IPR001436 Alpha crystallin/Heat shock protein |
Orthology group | ND |
Nucleotide sequence:
ATGTCTCTGTTGCCATTCGTGTTGGGTTACGAACGACCTCACCGTATCATCGATCAGGAC
TTCGGCTTGTCTTTGACTCCCGACGATCTACTGACTGTTGCCGTGTCTCCACTACTATCA
CGAGACTACTACAGACCCTGGCGTCAGATGGCGGCTGCTGCGAGGGACGTCGGATCCACC
ATCAAGTCGGACAAAGATAAATTCCAAGTCAACTTGGACGTGCAGCATTTCAAACCTGAG
GAAATAACTGTGAAGACTGCAGACGGTTACATAGTCGTGGAAGGAAAACACGAAGAAAAG
AAAGATGAACACGGCTTTATCTTTTTTTTCCTTCTCAATATTTACAAGTTCTTGTCTATA
TATCAATCGTATAGTGACATAATTTACTATGACAATATACAGACTCCCTAA
Protein sequence:
MSLLPFVLGYERPHRIIDQDFGLSLTPDDLLTVAVSPLLSRDYYRPWRQMAAAARDVGST
IKSDKDKFQVNLDVQHFKPEEITVKTADGYIVVEGKHEEKKDEHGFIFFFLLNIYKFLSI
YQSYSDIIYYDNIQTP