New model in OGS2.0 | DPOGS200498  |
---|---|
Genomic Position | scaffold823:+ 11395-12988 |
See gene structure | |
CDS Length | 444 |
Paired RNAseq reads   | 2984 |
Single RNAseq reads   | 9543 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010541 (1e-51) |
Best Drosophila hit   | effete (3e-78) |
Best Human hit | ubiquitin-conjugating enzyme E2 D3 isoform 2 (3e-75) |
Best NR hit (blastp)   | effete [Drosophila melanogaster] (5e-80) |
Best NR hit (blastx)   | effete [Drosophila melanogaster] (1e-81) |
GeneOntology terms    | GO:0004842 ubiquitin-protein ligase activity GO:0007286 spermatid development GO:0007140 male meiosis GO:0051276 chromosome organization GO:0007067 mitosis GO:0005515 protein binding GO:0001745 compound eye morphogenesis GO:0048477 oogenesis GO:0001751 compound eye photoreceptor cell differentiation GO:0045676 regulation of R7 cell differentiation GO:0016567 protein ubiquitination GO:0051246 regulation of protein metabolic process GO:0016322 neuron remodeling GO:0005875 microtubule associated complex GO:0030718 germ-line stem cell maintenance GO:0048132 female germ-line stem cell division GO:0008054 cyclin catabolic process GO:0031647 regulation of protein stability |
InterPro families    | IPR023313 Ubiquitin-conjugating enzyme, active site IPR016135 Ubiquitin-conjugating enzyme/RWD-like IPR000608 Ubiquitin-conjugating enzyme, E2 |
Orthology group | MCL11277 |
Nucleotide sequence:
ATGGCGTTAAAACGAATTAATAGGGAATTACAAGATCTGGGTCGAGACCCCCCAGCACAA
TGTTCCGCAGGACCACACGGGGAAGATCTATTCCACTGGCAGGCCACAATTATGGGTCCA
GTGGACAGTCCTTACCAGGGTGGAGTGTTCTTTCTGACCATACATTTCCCTACAGACTAT
CCATTTAAACCACCAAAGGTTGCGTTCACGACACGTATCTATCACCCCAACATAAACAGT
AATGGTTCCATTTGTCTTGATATCTTGCGTTCACAATGGTCGCCAGCTCTTACTATATCC
AAAGTGTTGCTGTCAATTTGCTCACTGTTATGTGATCCGAACCCCGATGATCCACTGGTG
CCAGAAATCGCTAGGATCTACAAAACTGACAGAGAAAAGTACAATGAATTAGCCCGAGAG
TGGACAAGGAAGTATGCCATGTGA
Protein sequence:
MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY
PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
PEIARIYKTDREKYNELAREWTRKYAM