| New model in OGS2.0 | DPOGS204239 |
|---|---|
| Genomic Position | scaffold777:+ 81102-84996 |
| See gene structure | |
| CDS Length | 1806 |
| Paired RNAseq reads | 5555 |
| Single RNAseq reads | 14179 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007516 (0.0) |
| Best Drosophila hit | elongation factor 1alpha100E, isoform C (0.0) |
| Best Human hit | elongation factor 1-alpha 1 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to putative elongation factor 1-alpha isoform 1 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | GJ23103 [Drosophila virilis] (0.0) |
| GeneOntology terms | GO:0006414 translational elongation GO:0003746 translation elongation factor activity GO:0005737 cytoplasm GO:0005853 eukaryotic translation elongation factor 1 complex GO:0006412 translation GO:0003924 GTPase activity GO:0005525 GTP binding GO:0005811 lipid particle |
| InterPro families | IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel IPR000795 Protein synthesis factor, GTP-binding IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IPR004161 Translation elongation factor EFTu/EF1A, domain 2 IPR004539 Translation elongation factor EF1A, eukaryotic/archaeal |
| Orthology group | MCL10264 |
Nucleotide sequence:
ATGGGCAAGGAAAAGACGCACATCAACATCGTTGTGATCGGTCACGTGGACTCCGGCAAG
TCCACTACTACCGGCCATCTGATTTATAAGTGTGGTGGAATCGATAAGCGTACTATCGAG
AAGTTTGAGAAGGAGGCGCAGGAGATGGGCAAGGGCTCGTTCAAGTACGCCTGGGTGCTG
GACAAGCTAAAGGCGGAGCGCGAACGTGGTATCACCATTGATATTGCCTTGTGGAAGTTC
GAGACTGCCAAGTACTACGTTACCATCATCGACGCCCCTGGCCATAGAGACTTCATCAAG
AACATGATCACTGGAACCTCGCAGGCGGACTGCGCCGTGCTGATAGTTGCGGCTGGTACG
GGTGAGTTCGAGGCCGGCATCAGTAAGAACGGTCAGACCCGCGAGCACGCGCTGTTAGCT
TTTACCCTGGGGGTGAAGCAACTGATCGTGGGCGTCAACAAGATGGACTCCACCGAGCCG
CCGTACCATGAGGCGAGATACGAGGAGATCAAGAAGGAAGTGTCCTCTTACATCAAGAAG
ATCGGGTACAACCCGGCGACCGTGGCGTTCGTGCCCATCTCGGGCTGGCACGGAGATAAC
ATGTTGGAGCCTTCGGACAAGATGCCCTGGTTCAAGGGGTGGACCATTGACCGCAAGGAC
GGGAAAGTGGAGGGCAAGTGCCTCATTGAGGCCCTGGACGCTATCCAGCCTCCGTCTCGT
CCCACCGAGAAGCCGCTGCGTCTTCCTCTGCAGGACGTGTACAAGATCGGAGGCATCGGG
ACAGTGCCCGTAGGACGAGTCGAGACCGGCATCCTGAAACCCGGCATGGTGGTTGTGTTC
GCGCCCGCGGCCATCACCACCGAGGTGAAGTCTGTGGAGATGCACCACGAGGCCTTGCAG
GAGGCGATGCCTGGAGACAACGTGGGCTTCAACGTGAAGAACGTGTCGGTGAAGGAGTTG
CGTCGCGGCTACGTGGCCGGTGACTCCAAGAACTGCCCGCCCAAGGGTGCTTCGGACTTC
ACCGCCCAGGTGATCGTGTTGAACCACCCGGGGCAGATCAGCAACGGCTATACCCCGGTG
CTGGACTGTCACACCGCTCACATCGCCTGCAAGTTCGCTGAGATCAAGGAGAAGTGCGAC
CGTCGTACTGGCAAGACGACCGAGGTGGAGCCGAAGTCCATCAAGTCCGGCGACGCGGCC
ATCGTCACCCTAGTGCCGACCAAGGCGCTGTGTGTGGAGTCGTTCCAGGAGTTCCCGCCG
CTGGGACGCTTCGCCGTCCGGGACATGCGTCAGACGGTTGCCGTTGGAGTCATCAAGGTA
CCCCAGCGTGTATACCCCCGGTCTCCCCCGCGGCCTCCCAGCCCGATCGCCTACGGCGTC
CCCATTCCCAACGTAGAGTCAGTGTCCCCCCCCAATCGGAGCTTCTTCGCTGGTGACATC
GACCCCGGACCCACCTCGTGCATTTATCTCAACAAGATACTCAAGTTTTTTCGTCTTAGT
TACGTTTACTTTATAGGTTTATGTCTTTGTGATTATTTTAGAGGTAAGTTACTGGAGAAG
TTTGAGTTGCCGTACTTGTTGTCGCGGTTCGTTTTATTTTTCCATCGCAAGGAGTTCAGG
AGGAAAGACGACGGCGGCGAATTTAAAATTGAACTTTTAAGCCTTTTAGAAGTTTTGTTG
TATGAGACTCTGCTCCTGTACGCCATCATAACTAAATTGCTTAAGATCGTACTGAACATC
TCGTCCTTGTTTCTGTTAGATTGGTCGGTGAGTTTTTTATGTAATTTAGTTATGTCTAAT
TTCTAA
Protein sequence:
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK
IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPSR
PTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEALQ
EAMPGDNVGFNVKNVSVKELRRGYVAGDSKNCPPKGASDFTAQVIVLNHPGQISNGYTPV
LDCHTAHIACKFAEIKEKCDRRTGKTTEVEPKSIKSGDAAIVTLVPTKALCVESFQEFPP
LGRFAVRDMRQTVAVGVIKVPQRVYPRSPPRPPSPIAYGVPIPNVESVSPPNRSFFAGDI
DPGPTSCIYLNKILKFFRLSYVYFIGLCLCDYFRGKLLEKFELPYLLSRFVLFFHRKEFR
RKDDGGEFKIELLSLLEVLLYETLLLYAIITKLLKIVLNISSLFLLDWSVSFLCNLVMSN
F