| Genomic Position | scaffold110:- 77235-80395 |
|---|---|
| See gene structure | |
| CDS Length | 1266 |
| Paired RNAseq reads | 3516 |
| Single RNAseq reads | 9338 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008292 (5e-43) |
| Best Drosophila hit | CG11138, isoform B (2e-35) |
| Best Human hit | interferon regulatory factor 2-binding protein 2 isoform A (9e-32) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC007295 [Tribolium castaneum] (1e-115) |
| Best NR hit (blastx) | PREDICTED: similar to CG11138 CG11138-PC [Tribolium castaneum] (4e-57) |
| GeneOntology terms | GO:0005634 nucleus GO:0045449 regulation of transcription |
| InterPro families | IPR022750 Interferon regulatory factor 2-binding protein 1 & 2 IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | MCL12033 |
Nucleotide sequence:
ATGTCGGTGATGCAGAAGCGACAGCACTGCTACCTGTGCGATCTGCCGCGCATGCCGTGG
GCGATGCTGCACGACTTCTCCGAGGCGGTATGTCGGGGCTGCGTTAACTACGAGGGCGCC
GACAGGATCGAGGTGGTCCTCGAGACCGCGAGACAGTTGAAACGCGCCCACGGTTTCCAG
GAGGGACGCGCTCCGACCCACGTGAAGGGAGCTCACAGGGCGTCCATGGAGCCTCATCAG
AACGGAGGGGAATCCAACGCAAGAGGACAGCCGGCCCCTCCGGCTCACCACGCTCCCGCT
GCCGGGTTCCCCTTGCATCATTCGAGGCCGGCCACGAACGCGGGACTCTTGGCCGAGTAC
GGGAGCCGCAGGGAGGAGCACGAGGGTAGGAGGATGGCTCACGTACCTCTAGCCCACCTC
CAGACGCACGGGGCTCGCCTGGCGCCAGGATTGACCCTAAAGCGACCGTTGGACGAAGAT
GACCATCAGACACACCACGAGCCGACGAAGAGGCTACTGGAGGAGCACTCCCGGCCGCCG
CTGACCCGGGGTGACTCGCTCCCGGCCGTGTCCCTGGCCGCTCCGTTCGCGCCGGACAGA
GTCTTCAAACAGGAGAAACATCCTCTCCGCACACCATCATTCGATGCGTCCTCTTTTAAA
TCTAACGGGTACGGTAGCGGCGCTCCGTTGACCAACGGCTCGGCAGGGTCTCCTCTGGGT
CGCACCGCGGGGTCTCCTCCCGTGACGGGCGCGGCGGGCCCCTCGCCCATGGCGGCCCTG
ATGTCGGTGACGGACACCCTGCCGCCGGGCTCCCCGCGCTCCGCCGGCGGCTCACCCCCG
CAACCTCCGCCCCAGCGCTCCGCGAGCCGGTCCAGCCAGCACTCGCCCAACTCCTCGGGG
TCGAACGGCGGGCGGCGGTCGTCGGGGTCGCGGCACGTGTCCTCCACGACGTCAGTCTCG
TCGTCGGAGGCGGGTGAGGGCGCGGACGCTGCGGCGCCGGCCCCCGCGCCGCTCCTCAAG
TGCACCCTCTGCCAGGAGCGCCTCGAGGACACGCACTTCGTGCAGTGCCCGAGCCAGCCC
CACCACAAGTTCTGCTTCCCGTGCTCGCGCGACTCCATCAAGCGCCAAGCCGGCTCCGAG
GTGTACTGTCCCAGCGGTGAGAAGTGTCCGCTGGCCAACTCGGCCGTGCCGTGGGCGTTC
ATGCAGGGCGAGATCGCCACCATCCTGGGCGACGACTTCAAGCCGAAGAAGGAGCGCGAG
ACGTAG
Protein sequence:
MSVMQKRQHCYLCDLPRMPWAMLHDFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQ
EGRAPTHVKGAHRASMEPHQNGGESNARGQPAPPAHHAPAAGFPLHHSRPATNAGLLAEY
GSRREEHEGRRMAHVPLAHLQTHGARLAPGLTLKRPLDEDDHQTHHEPTKRLLEEHSRPP
LTRGDSLPAVSLAAPFAPDRVFKQEKHPLRTPSFDASSFKSNGYGSGAPLTNGSAGSPLG
RTAGSPPVTGAAGPSPMAALMSVTDTLPPGSPRSAGGSPPQPPPQRSASRSSQHSPNSSG
SNGGRRSSGSRHVSSTTSVSSSEAGEGADAAAPAPAPLLKCTLCQERLEDTHFVQCPSQP
HHKFCFPCSRDSIKRQAGSEVYCPSGEKCPLANSAVPWAFMQGEIATILGDDFKPKKERE
T