| New model in OGS2.0 | DPOGS210549 |
|---|---|
| Genomic Position | scaffold170:+ 3380-8174 |
| See gene structure | |
| CDS Length | 1503 |
| Paired RNAseq reads | 2 |
| Single RNAseq reads | 4 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013437 (1e-69) |
| Best Drosophila hit | CG10345 (2e-47) |
| Best Human hit | scavenger receptor class B member 1 isoform 1 (4e-26) |
| Best NR hit (blastp) | scavenger receptor class B, member 1-like [Tribolium castaneum] (2e-64) |
| Best NR hit (blastx) | scavenger receptor class B, member 1-like [Tribolium castaneum] (2e-62) |
| GeneOntology terms | GO:0005044 scavenger receptor activity GO:0005887 integral to plasma membrane GO:0006952 defense response GO:0007155 cell adhesion GO:0016020 membrane |
| InterPro families | IPR002159 CD36 antigen |
| Orthology group | MCL30891 |
Nucleotide sequence:
ATGGCCCTAGGAATACTGTTTGTGGTACTACCGATTGTAACTCTCTTTGTGGATCCAGTG
CTTATGGCAATGAAATATTTAACTCGTATGTCAGTCGGCTCGAAAATATACACAATGATG
AAGGAGGAAATTCCAGGAGCGCTTATTAACGTTTATATTTTCAATATAACCAACGGAGAA
GCCTTCGTCTCCGGTGAGGATTATAAACTGAAAGTTGAACAAGTTGGACCTTTTGTTTAT
CAGGAGTTCCGTACAAACGAAGGCTTTGAAATTGATGAGGAAGCGGGTGTAATGCGTTAC
ACCCCCATTGCTGCCGCGCGGTTCATGCCGGAACGATCTATCGCCGACCCACGACACGTC
AATATTACTGTTATCAATACTATAATGCTTGCACTAGCATCTATGTTGAGTTCCTATTCT
ATATTTGGAAAATCTGGCTACAATTTGTTAATAAATCAACTACAGTCGAAACCATTCCTC
AACATTGATGTGGACAGCTATTTTTGGGGGTATGATGACCCACTAATTGCTTTAGGCAAC
ACCCTTATGCCAGGATGGATTACCTTCCAAAGATTGGGTATTTTAGATAGGTTATACGAC
CCAGCGGCCGTCCCGCGACTGGAACTTGGAATCCATGACGAAGATAAGTTTAATATAAGG
ACCGCGAACGGATGTCCCGGCCTCAAGGTATGGCAATACGAAAATCCTTCAAAACGTTCT
CGATGCAATACTTTCACTGACGCCTATGAGGGCTTTGCCTTCCCCCCAGGACTCACTCCT
GACCGAGCTCTCAGACTGTACCGTAACGTGTTCTGTCGGATGCTAGAGCTGAGGTTCGTT
GACACTAAGCCACTGGACTTCGGTCCTGAAAGTTTCGTATACCAAATCAGAAACGATAGT
TTTGCTGTCAACGCGGAAACCAACTGTCTCTGCGGCGAATATGGTTGCGCCGAAGGATTG
TCCAGTGCGGCGCCGTGTTTGTTCGGTTTTGATCTTGGATTGTCTTTCGGACATTTTTGG
AACGCTTATCCCAAAGTATATGAACGCATTGAGGGTATGCGTCCCGATGAAAAGGAACAC
GGTAGCGAGTTCCTGATTGATCCGAAAAGCGGTGCGGTTTTAGCAGCGAGATTCACTCTC
CAGTTAAACTTAATTGTTAGAGACGTTAGTTACAACAGCCTAACCAAACCATTCAGTGAA
ATGGTGATACCTATGACCTATTTAAAAATTGTCCAACCACCGTTACCAAACGAAGCAAAA
AATGTATTCAGATTTATGTACCAAGTCCTTCCTAACATTATACTCGGTCTACAGATTATA
ATATTCGTAATAGGTTTTATAATGATCGCGTACACCGTCAGAAGCATTTATTGGCAGGTT
ATTGTAAGAAAAGGTATTGATCTCTTAAATGCAAGTAATGAGGATAGGGTCCATGTACCA
CGTTCTGAAACACTTCTAGTAGAAGAGAAACCTTTGGATGAATATCGATTGTACTCGAAT
TAG
Protein sequence:
MALGILFVVLPIVTLFVDPVLMAMKYLTRMSVGSKIYTMMKEEIPGALINVYIFNITNGE
AFVSGEDYKLKVEQVGPFVYQEFRTNEGFEIDEEAGVMRYTPIAAARFMPERSIADPRHV
NITVINTIMLALASMLSSYSIFGKSGYNLLINQLQSKPFLNIDVDSYFWGYDDPLIALGN
TLMPGWITFQRLGILDRLYDPAAVPRLELGIHDEDKFNIRTANGCPGLKVWQYENPSKRS
RCNTFTDAYEGFAFPPGLTPDRALRLYRNVFCRMLELRFVDTKPLDFGPESFVYQIRNDS
FAVNAETNCLCGEYGCAEGLSSAAPCLFGFDLGLSFGHFWNAYPKVYERIEGMRPDEKEH
GSEFLIDPKSGAVLAARFTLQLNLIVRDVSYNSLTKPFSEMVIPMTYLKIVQPPLPNEAK
NVFRFMYQVLPNIILGLQIIIFVIGFIMIAYTVRSIYWQVIVRKGIDLLNASNEDRVHVP
RSETLLVEEKPLDEYRLYSN