| New model in OGS2.0 | DPOGS214461 |
|---|---|
| Genomic Position | scaffold882:- 16632-21449 |
| See gene structure | |
| CDS Length | 1224 |
| Paired RNAseq reads | 204 |
| Single RNAseq reads | 543 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011233 (7e-06) |
| Best Drosophila hit | CG9932 (5e-06) |
| Best Human hit | RE1-silencing transcription factor (4e-07) |
| Best NR hit (blastp) | hypothetical protein BRAFLDRAFT_71734 [Branchiostoma floridae] (3e-17) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_122441 [Branchiostoma floridae] (1e-14) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0005515 protein binding GO:0000785 chromatin GO:0005737 cytoplasm GO:0016564 transcription repressor activity GO:0005634 nucleus GO:0043234 protein complex GO:0003677 DNA binding GO:0003682 chromatin binding GO:0045665 negative regulation of neuron differentiation GO:0005622 intracellular GO:0032403 protein complex binding GO:0045892 negative regulation of transcription, DNA-dependent GO:0046872 metal ion binding |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type |
| Orthology group | ND |
Nucleotide sequence:
ATGAGTAGATGCTGTGTGGAACGATGCCCGAACACAAATGAAGATAAAATTTACTTTCCT
CGCCGTCGCCCCAAAGAGAAGGCAACACAGAACATTGTCGACATCAATGACGAGATACCC
GCGGCCACCATAGACAAGAACACGTTGAAGACTGTAAGCACCATAGACAAGAATATAGAG
ACGGAAAACAGTAAACACCATGAACCGAACGGAGATATTATCGAACGACTAGTAGCAAAC
TCGTCACAAGACAACGAAGCACACAAAGACATAGAAGACATTATAACGAACTATCAAATA
AAACAGATAAGACCTATAAACAGGGAAACGGAAACGGAAAAGGAAGGAGAAGTAGAGAAA
GAGGGAGAAGAAAGAAGAGAAAAAGAGATACAGAACGAGGAGAATGACGTGGTGACGATA
GAAGACGCCGCGCCCGTCTACATAGAAGTTAACGTAGACAAAGGTAGCGACGTGGCCGGC
GACTGTATGATGGTGCTGGAGAGCGTCCAGTGCGAGGTGGACCCCGGCCTGTTCGAGGAA
CAGGACAACGACCACGACCTGGACAGAGACTCGGATGTCATCGACCTTGGAGAGAGGAAG
GAGGATCCTATAAGTCTGCTGACGTCCAGCGACGAGGACGAGGTCGTCATAGAGGAACCT
CACATCGACACTGTGGAGGTGTCCGACGGAGACTCGGAGCACGACCTCGAGGAGGAGGAC
GATCTGCCGCTGGTGAAGCTGGTGCCGCACGGACACCGGAACAGGAAGTGGCCGCTCTAC
CAGTACTACTGTGTGGAGTGCGGCTTCACCACCGACGACAGGACGGAGTACAAGAAGCAC
AGGAGCGATCACACCACCGTCCTGGAGGTGTGCCAAGTGTGCGGCTACACGACGGCCAGC
AAGGCGCAGTTCGGCAGACACAAGAGGAAACACAAAGACGAGAAGAAATACAAGTGTCAC
CTGTGCGACTACAGGGCGAGGCACAACATGAGCCTCATATACCACCTCAAGTCGCACGAG
CGGGTCATAGTGAACGGCAAGGACGGGTACCAGTGCAGCAAGTGTAGCTACCGGAGCAAC
GTGAAGAGCAGCCTGGTGAGGCACGTCAGAATGTGCGGGGGCAGGTTCGCCTGCGAGGGC
TGCGACTACAAGACCAAGAGGGAGAGCGACCTGCGGAAACACCGGCTGCGGAGACACGCC
GCCTCCAGGAGAATACACAAGTGA
Protein sequence:
MSRCCVERCPNTNEDKIYFPRRRPKEKATQNIVDINDEIPAATIDKNTLKTVSTIDKNIE
TENSKHHEPNGDIIERLVANSSQDNEAHKDIEDIITNYQIKQIRPINRETETEKEGEVEK
EGEERREKEIQNEENDVVTIEDAAPVYIEVNVDKGSDVAGDCMMVLESVQCEVDPGLFEE
QDNDHDLDRDSDVIDLGERKEDPISLLTSSDEDEVVIEEPHIDTVEVSDGDSEHDLEEED
DLPLVKLVPHGHRNRKWPLYQYYCVECGFTTDDRTEYKKHRSDHTTVLEVCQVCGYTTAS
KAQFGRHKRKHKDEKKYKCHLCDYRARHNMSLIYHLKSHERVIVNGKDGYQCSKCSYRSN
VKSSLVRHVRMCGGRFACEGCDYKTKRESDLRKHRLRRHAASRRIHK