| New model in OGS2.0 | DPOGS208185 |
|---|---|
| Genomic Position | scaffold896:+ 4687-7822 |
| See gene structure | |
| CDS Length | 996 |
| Paired RNAseq reads | 1605 |
| Single RNAseq reads | 4555 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012780 (4e-142) |
| Best Drosophila hit | succinyl coenzyme A synthetase alpha subunit (2e-107) |
| Best Human hit | succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (4e-94) |
| Best NR hit (blastp) | succinyl-CoA synthetase small subunit, putative [Aedes aegypti] (6e-140) |
| Best NR hit (blastx) | succinyl-CoA synthetase small subunit, putative [Aedes aegypti] (2e-127) |
| GeneOntology terms | GO:0004776 succinate-CoA ligase (GDP-forming) activity GO:0045244 succinate-CoA ligase complex (GDP-forming) GO:0006099 tricarboxylic acid cycle GO:0004775 succinate-CoA ligase (ADP-forming) activity GO:0003878 ATP citrate synthase activity GO:0005488 binding |
| InterPro families | IPR005810 Succinyl-CoA ligase, alpha subunit IPR016102 Succinyl-CoA synthetase-like IPR003781 CoA-binding IPR005811 ATP-citrate lyase/succinyl-CoA ligase IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site IPR016040 NAD(P)-binding domain |
| Orthology group | MCL13236 |
Nucleotide sequence:
ATGGCTTTACCGGTACGGATTTTGTCTCGCTGCAAAGATGGCTTAAAGCTTGGCAGCATC
AGATACGCAAGTTCAACTCCATATGCTGAGACAAGAAAAAACTTAGTTCTCACGAATGAG
ACTAAAGTTATCGTACAAGGTTTCACTGGCAAACAGGGTACCTTCCACAGCCAGCAAGCT
CTTGATTATGGCACCAATATTGTGGGAGGTGTGTCACCAAAGAAAGCTGGTAGTGAACAT
CTCGGAAAGCCTGTATTTGGTTCCGTCAAGGATGCTAAGGAGAAGACAGGAGCTGAAGCT
ACTGTAATCTATGTTCCACCTCCCGGAGCAGCAGCTGCTATTCTAGAAGCCATTGAAGCT
GAAATGCCTCTGATTGTGTGCATCACAGAGGGAGTACCACAACATGACATGGTTCGCGTT
AAACACGCCCTGCTCCGTCAGAACAAGTCGCGTCTGGTCGGACCAAACTGCCCAGGTATT
ATCGCTCCTGAGAAGTGCAAGATCGGTATTATGCCGGCCGCGGTTCACAAAAAAGGTTGC
ATTGGTGTTGTGTCACGTTCAGGCACCTTGACCTATGAAGCCTGCCATCAGACCACCGTT
ACTGGTCTAGGTCAAACGCTTTGTGTCGGTATCGGCGGTGACCCCTTCAACGGAACCGAT
TTCATTGATTGCCTTGAAGTGTTCCTGAAGGACCCAGAGACTAAAGGCATTATACTCATC
GGTGAAATCGGAGGCAACGCCGAGGAATTGGCTTCTGAATATTTGACACAGCACAACACT
GGTCAAAAAGCCAAGCCTGTGGTTTCATTCATTGCCGGTCTGACAGCTCCGCCAGGTAGA
AGAATGGGTCATGCTGGGGCTATTATTTCCGGCGGAAAAGGTGGAGCCATGGATAAAATC
AAAGCTCTAGAGAAAGCCAACGTCATTGTCACCCGTTCTCCCGCCAAAATGGGTGTTGAA
CTTCTCAAGGAAATGAAAAGATTAGAAATTGTTTAA
Protein sequence:
MALPVRILSRCKDGLKLGSIRYASSTPYAETRKNLVLTNETKVIVQGFTGKQGTFHSQQA
LDYGTNIVGGVSPKKAGSEHLGKPVFGSVKDAKEKTGAEATVIYVPPPGAAAAILEAIEA
EMPLIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIGIMPAAVHKKGC
IGVVSRSGTLTYEACHQTTVTGLGQTLCVGIGGDPFNGTDFIDCLEVFLKDPETKGIILI
GEIGGNAEELASEYLTQHNTGQKAKPVVSFIAGLTAPPGRRMGHAGAIISGGKGGAMDKI
KALEKANVIVTRSPAKMGVELLKEMKRLEIV