New model in OGS2.0 | DPOGS209569  |
---|---|
Genomic Position | scaffold154:+ 46277-52415 |
See gene structure | |
CDS Length | 1143 |
Paired RNAseq reads   | 1006 |
Single RNAseq reads   | 3372 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006629 (2e-117) |
Best Drosophila hit   | CG13893 (5e-77) |
Best Human hit | SEC14-like protein 2 isoform 1 (4e-54) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP005701-PA, partial [Tribolium castaneum] (1e-102) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP005701-PA, partial [Tribolium castaneum] (1e-99) |
GeneOntology terms    | GO:0006810 transport GO:0005215 transporter activity GO:0005622 intracellular |
InterPro families    | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR009038 GOLD IPR011074 Phosphatidylinositol transfer protein-like, N-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR008273 Cellular retinaldehyde-binding/triple function, N-terminal |
Orthology group | MCL10946 |
Nucleotide sequence:
ATGCGTAAAATGCTGTTTCGAAGGAGCGTTAAAGATGTTTTGAAGCCCGAACACAATGAT
CACTTCCTACTAAGATGGTTGCGAGCGAGACAATGGAACCCGGAAGCTGCTGAGAAAATG
CTCCGAGATTCAATGCAATGGAGGGAGAAGTGGGGCATAGACACCACCCTAGAGTCTTGG
CAGGCGCCCGAAGTCCTCGAGAATCACTTCCCCAGCGGCACCACCGGCTTTGACAAGGAA
GGGTCACCACTGATAATCGTACCATTTGTGGGTTTGGACATCTGGGGTCTTCTGCACGCG
GTGTCCCGGACAGCACTCGCCCGGAAACAGGCTTCCACGCATGGACCCAACGCCCTGAAG
ATGACCGTTCTCTTCGACCTGGAAGGTTTCAACATGCGGCAGTACGCCTGGAAGCCGGCC
GCTGAGTTGGTGTTCTCATTGCTACAGATGTACGAGGCCAACTACCCCGAGATATTGAAA
ACCTGCTTCATCATCAACGCTCCAAAAGTATTCTCCCTGGCGTTTTCTGTGATCAAAAAG
TTTATGCACGAGTACACGATATCCAAAATACGTATATACGGTAGTGACGCCAAGAAGTGG
CAAGCGCAGGTGCTCGCCATGGTTGACAAGGACCAGTTACCAATGCATTACGGTGGGACT
ATGGTCGACGAGGATGGAGATCCGAAGTGCAGTTCTATGGTCAAACCCGGAGGCAAGGTG
CCCAAGAAATACTACTCCTGCAATATAGTCAACGAAAAAGAAAAGGAATATGAGAGAGTG
ACGGTGAAAACCGGGGATAAACATATAGTGGATCTATTGTGCGCTGACGGAGAAAGTGTA
CTGAAATGGGAGTTAGGAGTGGACAGCCATGACATAAAGTTCGTGATCAAGAAACGAGAT
CAAGACGGCAACGAGTCTGTGGTGCACGGGCCGAGGAAGGTGTCTGAAGGGCCGGTGGAC
GTCGGAGTGTTGCCTGTCTCAGGACCCGCTACATATTCAGTTATATTTGACAATAAGAGT
TCTTACCTGCGAAGCAAAAAAATTTACTACGACGTCCTCATCTCAGTTCCCGAAAGGGAT
CTTAACATGACCGACATGCCTGAAGACCAAATACCGACTGAAACATGTGCGGTGAAAACA
TAA
Protein sequence:
MRKMLFRRSVKDVLKPEHNDHFLLRWLRARQWNPEAAEKMLRDSMQWREKWGIDTTLESW
QAPEVLENHFPSGTTGFDKEGSPLIIVPFVGLDIWGLLHAVSRTALARKQASTHGPNALK
MTVLFDLEGFNMRQYAWKPAAELVFSLLQMYEANYPEILKTCFIINAPKVFSLAFSVIKK
FMHEYTISKIRIYGSDAKKWQAQVLAMVDKDQLPMHYGGTMVDEDGDPKCSSMVKPGGKV
PKKYYSCNIVNEKEKEYERVTVKTGDKHIVDLLCADGESVLKWELGVDSHDIKFVIKKRD
QDGNESVVHGPRKVSEGPVDVGVLPVSGPATYSVIFDNKSSYLRSKKIYYDVLISVPERD
LNMTDMPEDQIPTETCAVKT