| New model in OGS2.0 | DPOGS207628 |
|---|---|
| Genomic Position | scaffold432:- 20119-23756 |
| See gene structure | |
| CDS Length | 1422 |
| Paired RNAseq reads | 10931 |
| Single RNAseq reads | 25392 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006013 (0.0) |
| Best Drosophila hit | CG9140 (0.0) |
| Best Human hit | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial isoform 1 precursor (0.0) |
| Best NR hit (blastp) | NADH dehydrogenase flavoprotein 1 ubiquinone [Glossina morsitans morsitans] (0.0) |
| Best NR hit (blastx) | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0003954 NADH dehydrogenase activity GO:0006120 mitochondrial electron transport, NADH to ubiquinone GO:0005747 mitochondrial respiratory chain complex I GO:0051287 NAD or NADH binding GO:0051539 4 iron, 4 sulfur cluster binding GO:0010181 FMN binding GO:0008137 NADH dehydrogenase (ubiquinone) activity |
| InterPro families | IPR011537 NADH ubiquinone oxidoreductase, F subunit IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding IPR019554 Soluble ligand binding domain |
| Orthology group | MCL11394 |
Nucleotide sequence:
ATGGCTGGTGCGCTGGCGAGAATAATCCACGGGTCCAAAAATCAATTAGGATTTGTCGGA
CCCCTAGTTGCTGTCAATAATGGTTCTGTACGTTTTCAACAAACTAAGACTAGTTTTGGA
CCATTGGCTGATAGCGACAGGATTTTCACCAATTTGTATGGAAGACACGACTGGCGACTG
AGAGGAGCTTTGCAGCGGGGCGATTGGTATAAGACGAAGGAGATTATATTAAAAGGAACA
GACTGGATTGTCAATGAACTCAAGACATCTGGTTTGCGGGGTCGTGGTGGTGCCGGTTTT
CCCACTGGAATGAAATGGTCATTTATGAACAAGCCCTCTGACGGGAGGCCAAAATACCTG
GTTGTTAACGCTGATGAGGGTGAACCGGGAACTTGTAAAGATCGTGAGATCATGAGACAT
GATCCCCACAAGCTTGTTGAAGGTTGCCTGATAGCTGGTGCTGCTATGGGCGCCCAGGCA
GCTTATATTTATATAAGAGGCGAGTTCTATAATGAAGCCAGCAACTTGCAAGTGGCTATT
GCTGAAGCTTATCAAGCTGGTTTGATTGGTAAGAATGCATGTGGCTCCGGCTACAACTTT
GATGTATTCGTTCACCGTGGCGCCGGAGCTTATATCTGTGGGGAGGAGACTGCCCTTATA
GAGTCCATTGAAGGCAAGCAAGGCAAGCCACGCTTGAAGCCCCCCTTCCCAGCTGATGTC
GGACTCTTTGGATGCCCTACTACCGTCAACAATGTTGAGACCATTGCTGTTTCACCGACA
ATCTGTCGCCGCGGTGGGTCATGGTTCGCGTCATTCGGCCGAGCTAGGAACAGCGGCACC
AAGTTGTTCAACATTTCCGGTCACGTGAACACGCCGTGTACAGTTGAGGAGGAAATGAGC
ATCCCTCTCAAAGAACTCATCGAGAGACACGCCGGCGGCGTCTGCGGGGGCTGGGATAAC
TTATTGGCTATCATACCAGGAGGATCATCAACACCACTCATACCCAAAGATGTATGCGAA
ACAGCAATAATGGACTTTGACGGCCTGGTCGCTGTGCAGACTTCCTTAGGAACTGCTGCC
ATTATAGTCATGGACAAGTCCACTGACATAGTGAAAGCCATCGCTAGACTCATCATGTTC
TACAAGCACGAATCGTGCGGGCAATGCACCCCCTGTAGAGAAGGCGTCTCTTGGATGAAC
AAGATTATATACAGATTTGTCGATGGCAATGCGTCGCCGAAGGAAATCGACATGCTGTGG
GAAATATCTAAACAAATTGAAGGACACACAATCTGCGCTTTAGGTGATGGCGCCGCGTGG
CCGGTTCAAGGTCTTATACGTCACTTCCGGCCTGAACTCGAGCGACGTATGGCGGTATAT
GCCGCCGCTCACGGACCAAGTCTTGCTGAGAGATTGTACTAA
Protein sequence:
MAGALARIIHGSKNQLGFVGPLVAVNNGSVRFQQTKTSFGPLADSDRIFTNLYGRHDWRL
RGALQRGDWYKTKEIILKGTDWIVNELKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYL
VVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGAAMGAQAAYIYIRGEFYNEASNLQVAI
AEAYQAGLIGKNACGSGYNFDVFVHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADV
GLFGCPTTVNNVETIAVSPTICRRGGSWFASFGRARNSGTKLFNISGHVNTPCTVEEEMS
IPLKELIERHAGGVCGGWDNLLAIIPGGSSTPLIPKDVCETAIMDFDGLVAVQTSLGTAA
IIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLW
EISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMAVYAAAHGPSLAERLY