Monarch geneset OGS2.0

DPOGS207628
TranscriptDPOGS207628-TA1422 bp
ProteinDPOGS207628-PA473 aa
Genomic positionDPSCF300199 - 90795-94432
RNAseq coverage4879x (Rank: top 3%)
Annotation
HeliconiusHMEL0214350.093.74% 
BombyxBGIBMGA006013-TA0.090.62% 
DrosophilaCG9140-PA0.088.42% 
EBI UniRef50UniRef50_P498210.085.35%NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=134 Tax=cellular organisms RepID=NDUV1_HUMAN
NCBI RefSeqNP_001164305.10.083.55%NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Tribolium castaneum]
NCBI nr blastpgi|2897435270.082.98%NADH dehydrogenase flavoprotein 1 ubiquinone [Glossina morsitans morsitans]
NCBI nr blastxgi|2830467180.083.94%NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Tribolium castaneum]
Group
Gene OntologyGO:00166513.2e-189oxidoreductase activity, acting on NADH or NADPH
GO:00101813.2e-189FMN binding
GO:00515393.2e-1894 iron, 4 sulfur cluster binding
GO:00512873.2e-189NAD binding
GO:00551143.2e-189oxidation-reduction process
KEGG pathwaytca:6594590.0 
 K03942 (NDUFV1)maps-> Huntington's disease
    Oxidative phosphorylation
    Alzheimer's disease
    Parkinson's disease
InterPro domain[48-456] IPR0115373.2e-189NADH ubiquinone oxidoreductase, F subunit
[88-256] IPR0115388.5e-52NADH:ubiquinone oxidoreductase, 51kDa subunit
[371-416] IPR0195757e-22NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
[283-332] IPR0195542.6e-06Soluble ligand binding domain
Orthology groupMCL11170 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207628-TA
ATGGCTGGTGCGCTGGCGAGAATAATCCACGGGTCCAAAAATCAATTAGGATTTGTCGGACCCCTAGTTGCTGTCAATAATGGTTCTGTACGTTTTCAACAAACTAAGACTAGTTTTGGACCATTGGCTGATAGCGACAGGATTTTCACCAATTTGTATGGAAGACACGACTGGCGACTGAGAGGAGCTTTGCAGCGGGGCGATTGGTATAAGACGAAGGAGATTATATTAAAAGGAACAGACTGGATTGTCAATGAACTCAAGACATCTGGTTTGCGGGGTCGTGGTGGTGCCGGTTTTCCCACTGGAATGAAATGGTCATTTATGAACAAGCCCTCTGACGGGAGGCCAAAATACCTGGTTGTTAACGCTGATGAGGGTGAACCGGGAACTTGTAAAGATCGTGAGATCATGAGACATGATCCCCACAAGCTTGTTGAAGGTTGCCTGATAGCTGGTGCTGCTATGGGCGCCCAGGCAGCTTATATTTATATAAGAGGCGAGTTCTATAATGAAGCCAGCAACTTGCAAGTGGCTATTGCTGAAGCTTATCAAGCTGGTTTGATTGGTAAGAATGCATGTGGCTCCGGCTACAACTTTGATGTATTCGTTCACCGTGGCGCCGGAGCTTATATCTGTGGGGAGGAGACTGCCCTTATAGAGTCCATTGAAGGCAAGCAAGGCAAGCCACGCTTGAAGCCCCCCTTCCCAGCTGATGTCGGACTCTTTGGATGCCCTACTACCGTCAACAATGTTGAGACCATTGCTGTTTCACCGACAATCTGTCGCCGCGGTGGGTCATGGTTCGCGTCATTCGGCCGAGCTAGGAACAGCGGCACCAAGTTGTTCAACATTTCCGGTCACGTGAACACGCCGTGTACAGTTGAGGAGGAAATGAGCATCCCTCTCAAAGAACTCATCGAGAGACACGCCGGCGGCGTCTGCGGGGGCTGGGATAACTTATTGGCTATCATACCAGGAGGATCATCAACACCACTCATACCCAAAGATGTATGCGAAACAGCAATAATGGACTTTGACGGCCTGGTCGCTGTGCAGACTTCCTTAGGAACTGCTGCCATTATAGTCATGGACAAGTCCACTGACATAGTGAAAGCCATCGCTAGACTCATCATGTTCTACAAGCACGAATCGTGCGGGCAATGCACCCCCTGTAGAGAAGGCGTCTCTTGGATGAACAAGATTATATACAGATTTGTCGATGGCAATGCGTCGCCGAAGGAAATCGACATGCTGTGGGAAATATCTAAACAAATTGAAGGACACACAATCTGCGCTTTAGGTGATGGCGCCGCGTGGCCGGTTCAAGGTCTTATACGTCACTTCCGGCCTGAACTCGAGCGACGTATGGCGGTATATGCCGCCGCTCACGGACCAAGTCTTGCTGAGAGATTGTACTAA

Protein sequence:

>DPOGS207628-PA
MAGALARIIHGSKNQLGFVGPLVAVNNGSVRFQQTKTSFGPLADSDRIFTNLYGRHDWRLRGALQRGDWYKTKEIILKGTDWIVNELKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGAAMGAQAAYIYIRGEFYNEASNLQVAIAEAYQAGLIGKNACGSGYNFDVFVHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGLFGCPTTVNNVETIAVSPTICRRGGSWFASFGRARNSGTKLFNISGHVNTPCTVEEEMSIPLKELIERHAGGVCGGWDNLLAIIPGGSSTPLIPKDVCETAIMDFDGLVAVQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMAVYAAAHGPSLAERLY-