| New model in OGS2.0 | DPOGS214949 |
|---|---|
| Genomic Position | scaffold103:+ 66863-69109 |
| See gene structure | |
| CDS Length | 630 |
| Paired RNAseq reads | 567 |
| Single RNAseq reads | 2205 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004846 (8e-96) |
| Best Drosophila hit | Rab-protein 8 (4e-91) |
| Best Human hit | ras-related protein Rab-8B (1e-86) |
| Best NR hit (blastp) | small GTP binding protein RAB8 [Bombyx mori] (3e-109) |
| Best NR hit (blastx) | small GTP binding protein RAB8 [Bombyx mori] (9e-105) |
| GeneOntology terms | GO:0003924 GTPase activity GO:0007264 small GTPase mediated signal transduction GO:0005525 GTP binding GO:0015031 protein transport |
| InterPro families | IPR005225 Small GTP-binding protein IPR001806 Ras GTPase IPR020851 Small GTPase IPR013753 Ras IPR006688 ADP-ribosylation factor IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase |
| Orthology group | MCL12702 |
Nucleotide sequence:
ATGGCAAAAACTTACGACTATTTATTTAAATTACTTCTTATAGGTGATTCCGGAGTGGGA
AAAACATCTATATTATTTAGATTCTCTGAGGATGCTTTTAATATCTCATTTATATCAACC
ATTGGTATTGACTTCAAAATTCGTACAATAGATTTGGACGGCAAAAAAGTTAAATTACAA
ATATGGGATACGGCGGGTCAGGAAAGATTCCGTACAATTACAACGGCTTATTACCGTGGT
TCTATGGGCATTATGCTAGTTTATGATGTTACAAACGAGAAGAGCTTTGAAAATATTAAA
AATTGGATTAGGAATATTGAAGAGAATGCGAGTGCAGACGTGGAAAAAATGATTCTTGGC
AATAAATGTGACTTGGATGCAAAGAGACAGGTTTCTAAGGAAAGGGGAGAACAATTAGCT
GTAGAATATCAGATCAAATTTGTAGAAACGTCAGCAAAAGATTCTTTAAATGTCGAATAC
GCTTTCTATACATTAGCAAGAGATATCAAAGCTAAAATGGAGAAAAAGCAGGAGGCGAGT
AATCCTGCAGGTGCTCGTTCAGGGACCCACCAGCTGCGTGACGAGCGACCCAAGCCTACA
TCCTGGCTGTCTCGCTGCTCTGTGCTCTGA
Protein sequence:
MAKTYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ
IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG
NKCDLDAKRQVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEAS
NPAGARSGTHQLRDERPKPTSWLSRCSVL