| New model in OGS2.0 | DPOGS202152 |
|---|---|
| Genomic Position | scaffold7548:+ 39-5201 |
| See gene structure | |
| CDS Length | 1596 |
| Paired RNAseq reads | 929 |
| Single RNAseq reads | 2559 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003425 (8e-13) |
| Best Drosophila hit | cdep, isoform E (8e-49) |
| Best Human hit | FERM, RhoGEF and pleckstrin domain-containing protein 2 (7e-62) |
| Best NR hit (blastp) | PREDICTED: similar to FERM, RhoGEF and pleckstrin domain protein 2 [Canis familiaris] (2e-79) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC013717 [Tribolium castaneum] (1e-59) |
| GeneOntology terms | GO:0005085 guanyl-nucleotide exchange factor activity GO:0008092 cytoskeletal protein binding GO:0005856 cytoskeleton GO:0005622 intracellular GO:0005737 cytoplasm GO:0005488 binding GO:0035023 regulation of Rho protein signal transduction GO:0019898 extrinsic to membrane GO:0005089 Rho guanyl-nucleotide exchange factor activity GO:0016601 Rac protein signal transduction GO:0016322 neuron remodeling GO:0050790 regulation of catalytic activity |
| InterPro families | IPR000219 Dbl homology (DH) domain IPR011993 Pleckstrin homology-type IPR001849 Pleckstrin homology domain |
| Orthology group | MCL10395 |
Nucleotide sequence:
ATGGGTCGTGTGGAGTCTTCGGGGTCGGAGGCGGGTGCTCTGGGCCGCGCGTGTCTCGCC
CTGGAGCCTCTCGCGCTGCCCGTGGGTGCTCTGCTGACTAAACTGGACCGAGCGCTCGCA
CCGGAACATATACAAGACGCGGATATGGAAGGCCTGCTGGCGTTACCGGCTGGGCCGTTA
TTAGAATATCTCGACAGGATCTTATCTGCCATAGACTTACCGATACGGAACGGCGCCGAG
GACCCGGAGTACAAGGCGGTTGCCGAACTGCTGCACGACTATTTGACGACTACATGTGAT
GCGTACAAGTCGTACATATCGAGCGCGGGGACCACGGTGGGTCTGGTGGAGAGCGCCCGG
CGTCGCGGGGGCGCGGGCTCCCGGCACGCCGCGGCCTTCGACGCCGGCTCGCCGCTGCCG
CTCGCGTGTCTGCTGCTGCGGCCGCTGCACCGGCTGCATCACTACGAACACCTCGCCGAA
GAGCTGTGTCGCGTGTCGCCCCCGGCCTTGTGTCGTATGTCTCGCGACGCCCTCGCTCTG
TGTCGGCAGCTGTGTCGCGCGGCGGACGACCAGCTCACACACGTCGAGAACCACGCTACG
CTGTGTCAACTACAGAGAGACTTGCTAGGTTACGACAAACTACTAGTAGCCGACCGCGAG
TTCGTCAGATTGGGCTGTGTGTACAAACACTCTCCCAAAGGACTTCAGCAGAGAATGCTG
TTCCTGTTCAGCGACATCCTGATACTATCGTCCAAGAGTGCGAGCGGACACTTCCGCGCT
CACTCGGCACTGGCGGCGAGAGGACTCGTCGTTGAAAAAACTGACCAGGCGCATACATTC
ACCGTCACAGGCGAAGACACCGTAATAACGTTGAGCACGAGCAACGAAACAGAATACCGC
GGCTGGTTCAATGACCTCACGCGTACAGTGGACGCGGCGAACAAAACTAACAAGGTCATC
GACACTGAGCTCACACCCTACCTACAGGACTACGAGACGTCTAACTCCGAGGAGTGTTCC
ACTCCAGGCGCTAACAACGGCTCCAGCTCAGGGAACGCCCTGGCTCACGTGTGCTGGCAT
CGGACCACCTCACTCTCCCGGCGACAGCTGCATCTGGCTATGAGGAGCCAGTTGTCGGGG
TACCTGCTCCGTAAGTTCAAGAACTCTCACGGCTGGCAGAAGCTATGGGTCGTGTTCGCT
CTATGTACGCTGTTCTTCTACAAGACGGGCAGGGACAGCGCGCCGCTGGCCTCGCTACCG
CTACTGGGGTACAGCGTGGGCCCGCCGAGTGCTGGCGACGGGATCGACAAAGACTTCGTG
TTCAAGCTGCAGTTCAAGAACCACGTGTACTTCTTCAGAGCCGACAGCCATTACACTTAT
AATAGGCGAGTTGTTGATCGCAAGTGTACTCCGGAACGAGCATCCAATACCGAACACGGG
ATTGTGCCGCCCCGTCCCCCGTCCCCCGCCTCCCGCGTTATATCTGAACACCTACAATCT
CCTGCTGCGCATCTACCGTCGCTTGCCAAGTCACATGGATCGAGGTTCTTCAAGCGCCGA
TGGCGAAGCCGCCTCTCAGTTGAAAGCGACGACTGA
Protein sequence:
MGRVESSGSEAGALGRACLALEPLALPVGALLTKLDRALAPEHIQDADMEGLLALPAGPL
LEYLDRILSAIDLPIRNGAEDPEYKAVAELLHDYLTTTCDAYKSYISSAGTTVGLVESAR
RRGGAGSRHAAAFDAGSPLPLACLLLRPLHRLHHYEHLAEELCRVSPPALCRMSRDALAL
CRQLCRAADDQLTHVENHATLCQLQRDLLGYDKLLVADREFVRLGCVYKHSPKGLQQRML
FLFSDILILSSKSASGHFRAHSALAARGLVVEKTDQAHTFTVTGEDTVITLSTSNETEYR
GWFNDLTRTVDAANKTNKVIDTELTPYLQDYETSNSEECSTPGANNGSSSGNALAHVCWH
RTTSLSRRQLHLAMRSQLSGYLLRKFKNSHGWQKLWVVFALCTLFFYKTGRDSAPLASLP
LLGYSVGPPSAGDGIDKDFVFKLQFKNHVYFFRADSHYTYNRRVVDRKCTPERASNTEHG
IVPPRPPSPASRVISEHLQSPAAHLPSLAKSHGSRFFKRRWRSRLSVESDD