| New model in OGS2.0 | DPOGS211602 |
|---|---|
| Genomic Position | scaffold166:- 13289-23226 |
| See gene structure | |
| CDS Length | 1602 |
| Paired RNAseq reads | 3268 |
| Single RNAseq reads | 10310 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008214 (1e-14) |
| Best Drosophila hit | lethal (1) G0255, isoform B (0.0) |
| Best Human hit | fumarate hydratase, mitochondrial precursor (3e-172) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP001884-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | fumarate hydratase, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0005739 mitochondrion GO:0004333 fumarate hydratase activity GO:0005737 cytoplasm GO:0006099 tricarboxylic acid cycle GO:0006106 fumarate metabolic process GO:0045239 tricarboxylic acid cycle enzyme complex |
| InterPro families | IPR022761 Lyase 1, N-terminal IPR018951 Fumarase C, C-terminal IPR008948 L-Aspartase-like IPR005677 Fumarate hydratase, class II IPR020557 Fumarate lyase, conserved site IPR000362 Fumarate lyase |
| Orthology group | MCL10668 |
Nucleotide sequence:
ATGGCTACTACAATGTTTAAATTGTCGTCTGCCTTAATTAATTCGTCAAAAAACTATAGG
TATGTCGTGGGACTTATCAACAAATGCAACATCTCAACCACCTCTACCAGACTGCGTAAA
GAGCGTGATACTTTCGGCGAGCTGGATGTGCCTGATGACAGGCTGTATGGCGCCCAAACG
GTCAGGTCCGTCATGAATTTCCCCATCGGTGGCATCGAGGAAAGAATGCCGTACCCTGTC
ATCGTGGCCTTTGGTATCCTGAAGAAGGCTGCTGCTAAAGTGAACACGGAATATGGCTTG
GACAAGAAAATTGCGGATGCGATCATCGAGGCGTGTGATGACGTCATATCCGGGAAGCTG
TACCGAGAAGGCCACTTCCCCCTCGTCATCTGGCAGACTGGATCTGGCACACAGTCCAAC
ATGAACACCAATGAGGTGATATCCAACCGAGCCATTCAGATCCTGGGTGGTAAGCTTGGC
TCTAAGACGCCCGTTCATCCCAACGACCACGTGAACAAATCTCAGAGCTCCAACGACACC
TACCCAGCGGCGATGCACATCGCTGTGGCCATGGAGCTGAGGGATAGGCTGATGCCCGGT
CTCGTAGCGCTGAGGGACACCCTCGAGAAGAAGTCCAAGGAGTTTGAGAAGATCATCAAG
ATCGGAAGAACCCACTTGATGGATGCCGTTCCTCTCACCCTCGGCCAGGAGTTCAGCGGG
TACGCGACCCAGCTCACGTACGGGATAGAGCGAGTGTGCACCACGCTGCCTCGACTGCAC
TACCTGGCCCTGGGCGGAACGGCGGTCGGCACGGGACTCAACACCAGGAAGGGATTCGCT
GAGAAATGCGCTAAGGAAATCGCCACACTTACTGGCATCCCCTTCGAAACCGCCCCCAAC
AAGTTCGAGGCCCTGGCGGCCCACGACTCCATGGTGGAGGTCCACGGGGCCCTCAACACC
ATAGCGGTGTCCCTGATGAAGATCGCCAACGACATCCGCATGCTGGCTTCCGGTCCGCGC
TGCGGCCTCGCCGAGTTAATGCTGCCTGAGAACGAGCCCGGATCCTCTATCATGCCGGGC
AAAGTGAACCCGACTCAGTGCGAAGCGCTTACAATGTTGGCCGCTCAGGTGATGGGTAAC
CACGTGGCCTGCACCATCGGTGGCAGCAACGGACACTTTGAACTGAACGTCTTCAAGACA
ATGATGGTGGCCAACGTACTGAGATCCATTAGGCTTGCAAACTTTTTTAACGTTACTGAC
AAGTCACAGTTCATTGCCCGCATGCGTTCGAGCTCTCGCTCTGAATCGGTTTATCCCCCC
CCTGCCAGGAGCGTTAAACGCGACGGCTGCCAGGCGTTCAACAAGAACTGCGCTGTCGGC
ATTCAGGCTAACATTGCACAGATCAATAAGATCATGAAGGAGTCACTAATGTTGGTGACG
GCACTCAATCCACACATTGGATATGATAAGGCTGCGTTGATCGCTAAGACAGCACACAAG
GAAGGTGGAACCCTGAAGGACACGGCTATCAAACTAGGAATCCTCACCGCTGAACAGTTC
GACCAATGGGTCAGGCCGGAGGACATGCTCGGCCCCAAGTAG
Protein sequence:
MATTMFKLSSALINSSKNYRYVVGLINKCNISTTSTRLRKERDTFGELDVPDDRLYGAQT
VRSVMNFPIGGIEERMPYPVIVAFGILKKAAAKVNTEYGLDKKIADAIIEACDDVISGKL
YREGHFPLVIWQTGSGTQSNMNTNEVISNRAIQILGGKLGSKTPVHPNDHVNKSQSSNDT
YPAAMHIAVAMELRDRLMPGLVALRDTLEKKSKEFEKIIKIGRTHLMDAVPLTLGQEFSG
YATQLTYGIERVCTTLPRLHYLALGGTAVGTGLNTRKGFAEKCAKEIATLTGIPFETAPN
KFEALAAHDSMVEVHGALNTIAVSLMKIANDIRMLASGPRCGLAELMLPENEPGSSIMPG
KVNPTQCEALTMLAAQVMGNHVACTIGGSNGHFELNVFKTMMVANVLRSIRLANFFNVTD
KSQFIARMRSSSRSESVYPPPARSVKRDGCQAFNKNCAVGIQANIAQINKIMKESLMLVT
ALNPHIGYDKAALIAKTAHKEGGTLKDTAIKLGILTAEQFDQWVRPEDMLGPK