| New model in OGS2.0 | DPOGS211168 |
|---|---|
| Genomic Position | scaffold196:+ 9017-14064 |
| See gene structure | |
| CDS Length | 1707 |
| Paired RNAseq reads | 922 |
| Single RNAseq reads | 2184 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003154 (0.0) |
| Best Drosophila hit | cylindromatosis, isoform E (1e-150) |
| Best Human hit | ubiquitin carboxyl-terminal hydrolase CYLD isoform 2 (6e-109) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC014455 [Tribolium castaneum] (4e-164) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC014455 [Tribolium castaneum] (4e-153) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0008017 microtubule binding GO:0004221 ubiquitin thiolesterase activity GO:0003735 structural constituent of ribosome GO:0005840 ribosome GO:0006412 translation GO:0006511 ubiquitin-dependent protein catabolic process GO:0016579 protein deubiquitination GO:0042742 defense response to bacterium GO:0055090 acylglycerol homeostasis GO:0004843 ubiquitin-specific protease activity |
| InterPro families | IPR001593 Ribosomal protein S3Ae IPR000938 Cytoskeleton-associated protein, Gly-rich domain IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 |
| Orthology group | MCL13952 |
Nucleotide sequence:
ATGCAGCACTCGGGACACAATGAAAGGATCAAGTCTGTAAACCTGATTAATCACCTGGCA
CCGGAAAAGAGAAAAATAAGACAAAATACGTCAAACAGATCTGGGATCAGTGAGGAGTCT
GTACAAAGTAACAAAATGGTGAACGAAACTAAAAAGGTTGAGACTGGAGTCTTAATTGAT
GTCTGCGGTGGCGATGTCAACGAAGAGTTTTATGACTCTCCGTCGTTGGGATCCCCGCGT
GCTGTTAATTTGGAGGCTTCGAGTCAGTCCCCGCCTGTTTTAGATGACATCGGAGTGGGT
TCTCTGGTCGAAGTAGCGACTGACGTTGATCAAAACTACTACGGAGTTGTGAGATGGATC
GGACTCATTGATGACATAGCGACAGCCGGCGTGGAGTTGGAGCAGAGCGTGTGTGGTCTC
GGTGACGGCCTGCACCGCGGGTCACGTGTTTTCACGTGCGCCTCTGGACGGGCGCTGTTC
GTGCCCCTTCCTCTGTGCAGGAGAGACGCACGGTTCACGGACACGCCGCCCCCGGAGACC
CACCACACTGAGATCGGAGAACAGCCAGAGTGTCCCGTGGTGACCGGTGTAGTTCCCCCG
CTGACTTCGCTGGGTGACCTGGCGGGGAAGAACCGCGGTATCCAGGGACATCACAATTCA
TGTTACTTGGACGCCACGTTATTCGCGATGTTCACTTTCACCAGCGTCTTTGATGCCTTG
CTCTATAGGCCCCCTGAACCTGAGGATTCCCCTCACTACTCGGAGGTGCAGCGTGTTCTC
CGTGAGGAGGTGGTGAACCCACTCCGTCGTCACGGGTACGTGAGGGCCGACCGCGTCATG
AAGCTGCGTACACTGCTAGAGAGACTCTCGGATGTGCCAGGACTCACGTGCGAGGAGAAG
GATCCTGAAGAATTCCTCAACGGACTGGTGGCGCAGCTGCTGAGGGCTGAGCCGTTCCTG
AAATTGTCCTCCGGCCAGGAGGCGTTTTGCTACCAGCTGTTCGTGGAGAAGGATGAACAC
ATCACATTACCCAGTGTTCAGCAGCTGTTAGAACAATCATTTGCCACATCTGGAGTGAAA
CTAAGCGAGGTTCCCGCTGCGTTTATAATACAAATGCCCAGATTCGGCAAACAATACAAG
CTGTATCAAAGAGTGCAGCCATCTCCCTTGCTGGATGTCACTGATCTCATCGAAGGATTG
CCTCGCCAGTGCACTGTATGTGGCGGTCTTGCTCGCTGGGAATGTTCTTCGTGTGCAGGG
GGCGCTCTCGACGCGGGGGCCTTGTGCAACTCCTGCCTGAGGTTGGCACACGCCACCCGA
CCCACACATAAGGCCGTTCCTTTAACTATCAGTGAAGAATATGCGAATATTCTCGAGTCG
TGTCCAGTGCCGAGGGTGTACATGGAGTTGTTTGCTGTGCTCTGTATAGAGACCAGTCAC
TACGTAGCCTTCGTCAAGACAGGAGTCGGCCATGACGCGCCCTGGTGTTTCTTCGACTCA
ATGGCCGACAGGAAGGGGGAGCGCAACGGTTACAACATCCCAGAGATCGTGTGTGTGAGT
GAGCTGGGGTCGTGGCTGAGCGAGGAGGGCCGCGCGCTCGCTCGGGCTGCGCCCCTCGAC
CGCCACCTGCCCGCGCCGGCAAAACGACTCCTGTCAGACGCATACATGTGCTTCTACCGC
AGCCCCGATGTCGCTATGTACAGATAA
Protein sequence:
MQHSGHNERIKSVNLINHLAPEKRKIRQNTSNRSGISEESVQSNKMVNETKKVETGVLID
VCGGDVNEEFYDSPSLGSPRAVNLEASSQSPPVLDDIGVGSLVEVATDVDQNYYGVVRWI
GLIDDIATAGVELEQSVCGLGDGLHRGSRVFTCASGRALFVPLPLCRRDARFTDTPPPET
HHTEIGEQPECPVVTGVVPPLTSLGDLAGKNRGIQGHHNSCYLDATLFAMFTFTSVFDAL
LYRPPEPEDSPHYSEVQRVLREEVVNPLRRHGYVRADRVMKLRTLLERLSDVPGLTCEEK
DPEEFLNGLVAQLLRAEPFLKLSSGQEAFCYQLFVEKDEHITLPSVQQLLEQSFATSGVK
LSEVPAAFIIQMPRFGKQYKLYQRVQPSPLLDVTDLIEGLPRQCTVCGGLARWECSSCAG
GALDAGALCNSCLRLAHATRPTHKAVPLTISEEYANILESCPVPRVYMELFAVLCIETSH
YVAFVKTGVGHDAPWCFFDSMADRKGERNGYNIPEIVCVSELGSWLSEEGRALARAAPLD
RHLPAPAKRLLSDAYMCFYRSPDVAMYR