| New model in OGS2.0 | DPOGS205516 |
|---|---|
| Genomic Position | scaffold1180:- 26607-31501 |
| See gene structure | |
| CDS Length | 1623 |
| Paired RNAseq reads | 2301 |
| Single RNAseq reads | 5548 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000149 (0.0) |
| Best Drosophila hit | CG7861, isoform B (3e-61) |
| Best Human hit | tubulin-specific chaperone E (2e-59) |
| Best NR hit (blastp) | PREDICTED: similar to tubulin folding cofactor E [Nasonia vitripennis] (5e-94) |
| Best NR hit (blastx) | PREDICTED: similar to tubulin folding cofactor E [Nasonia vitripennis] (9e-91) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0005856 cytoskeleton GO:0009791 post-embryonic development GO:0014889 muscle atrophy GO:0008344 adult locomotory behavior GO:0048589 developmental growth GO:0048936 peripheral nervous system neuron axonogenesis GO:0006457 protein folding GO:0007409 axonogenesis GO:0000226 microtubule cytoskeleton organization GO:0007021 tubulin complex assembly GO:0051082 unfolded protein binding |
| InterPro families | IPR000938 Cytoskeleton-associated protein, Gly-rich domain IPR001611 Leucine-rich repeat |
| Orthology group | MCL12265 |
Nucleotide sequence:
ATGGTGGGCGCAATGCCTGTTAATTTAATACCAAAATTTTTCAATGGTGCCATGGAGAGC
CATAATGGTGACGATTGTGAGAGTCAAGTTTTTATCGGCAGTCGTGTAAAGTGTAATGAA
GATTTCGGTACTGTAAAATATATTGGGGAGGTCCAGGGCTACAAAGGGATCTGGTATGGG
GTTGAGTGGGACAACGCTGAGCGAGGAAAACATGACGGTTTCGTGGAAGACGTGCAATAC
TTCAAAACAACGAAACCTGGGGCTGGTTCCTTTGTACGCCCCAACAAAATCGCACCATTC
ACAACCTGCGCTGAAGCTATCAGGAGATACTACGGCGATCGGGAAGATGAGACAGTCGCA
GCTCACCGTAGAACAGTCATCAATGAATGGAAACGTGAAATGGGTGCTCCGTTCATTGAA
ATGGTCGGCTTTGAGAAGATACATCAGAAACAGAAATTTGATCGTCTCCAAGAGGTTTGT
GTCCACGACCAGAACATATCCAGGGCTGGTGATGTAGCAGCTCTGTGCCCTAACGTTCGA
AGCTTGGATGTCTCCCAGAACTTGTTTTCAAACTGGCGGGAGATCATTGAATTATCAGCA
CAACTGCCATTGAAAGAAATTGATGTGAGTAAGAATCGCATGGCAATCGATATACCTGAA
GAAACACTGGAACAGCTCTCAATACACTTTGCTAGCCTGGAGAAGATAAACATCTCGGTC
TGTGATTATGAATGGTCGGATGTACTCGCACTCTCCCATCTCTGGCCTAAAATCAATGAG
ATCATAGCAGCCTACAACAGAATCACCATCATTAACCCACCGGCAGTGACCCTACGGACA
TTAACAATCCTCAGGCTGGACGGCAACCCCATAGAATCATGGTGTGAGGTCATTAACCTG
GGCCTCAAAAACCTCAAAGTGTTAAGCCTGAACGACTGTTGTATAGAGGAAATCAGATTT
AAAGATACGAAACCGGATGCTAAGGCTAGTGTATTTGAGAATTTAGAAGTGCTGTTCCTA
AACAGGAATAAAATCAAAGATTGGAGGTCAATAAGTGAGCTGAATAAATTGAAATCTCTA
AAGAAACTTTATTTCTTGAAAAATCCTATCCAATACGAAGAAGACTATGATACCGGATCT
CAACTAATTATAGCCAAAATTGGTAATCTTCAGGAATTGAATGGTTCATGCATAACTCGA
GAACTTCGTCGGGGCTCAGAATATGACTACATGAAGAGATACGGGGCCGAGTGGAAGAAA
GGGGATGAACAGTTCCACTTTGAGCACTGTAGATTCCAAGAACTGATTGATAAATATGGT
GTCCCAGACGACAGTCTGCTGGTAAAACAAAATAAAGACACGACTCTCACATCACAACTA
TTAGAAATAACGATCAAAGATGAAAACGGCAAGATCCTCAAGAAGAAATTCCCATCTACC
ATGGCGGTACAGAAACTGGTAACACTGGCACAGAGATTATTTTCTAAAGGAAAAATCGGA
ACACCCTTTCTATATATACAGGATGATCAGATGCACTCGGATGTCATCATGGATAATGTG
ATGAAAGACCTAGCGTTCTTCTCCATTAAAAATGGCGACACAATACTGGTTAAATTCAGA
TAA
Protein sequence:
MVGAMPVNLIPKFFNGAMESHNGDDCESQVFIGSRVKCNEDFGTVKYIGEVQGYKGIWYG
VEWDNAERGKHDGFVEDVQYFKTTKPGAGSFVRPNKIAPFTTCAEAIRRYYGDREDETVA
AHRRTVINEWKREMGAPFIEMVGFEKIHQKQKFDRLQEVCVHDQNISRAGDVAALCPNVR
SLDVSQNLFSNWREIIELSAQLPLKEIDVSKNRMAIDIPEETLEQLSIHFASLEKINISV
CDYEWSDVLALSHLWPKINEIIAAYNRITIINPPAVTLRTLTILRLDGNPIESWCEVINL
GLKNLKVLSLNDCCIEEIRFKDTKPDAKASVFENLEVLFLNRNKIKDWRSISELNKLKSL
KKLYFLKNPIQYEEDYDTGSQLIIAKIGNLQELNGSCITRELRRGSEYDYMKRYGAEWKK
GDEQFHFEHCRFQELIDKYGVPDDSLLVKQNKDTTLTSQLLEITIKDENGKILKKKFPST
MAVQKLVTLAQRLFSKGKIGTPFLYIQDDQMHSDVIMDNVMKDLAFFSIKNGDTILVKFR