| New model in OGS2.0 | DPOGS205869 |
|---|---|
| Genomic Position | scaffold1969:- 41931-50722 |
| See gene structure | |
| CDS Length | 1689 |
| Paired RNAseq reads | 1398 |
| Single RNAseq reads | 3715 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000104 (0.0) |
| Best Drosophila hit | delta-coatomer protein, isoform B (7e-123) |
| Best Human hit | coatomer subunit delta isoform 1 (9e-127) |
| Best NR hit (blastp) | coatomer protein complex subunit delta [Bombyx mori] (0.0) |
| Best NR hit (blastx) | coatomer protein complex subunit delta [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0000139 Golgi membrane GO:0005515 protein binding GO:0005737 cytoplasm GO:0005794 Golgi apparatus GO:0005829 cytosol GO:0006886 intracellular protein transport GO:0006890 retrograde vesicle-mediated transport, Golgi to ER GO:0016020 membrane GO:0016044 cellular membrane organization GO:0016192 vesicle-mediated transport GO:0030131 clathrin adaptor complex GO:0030663 COPI coated vesicle membrane GO:0031410 cytoplasmic vesicle GO:0048205 COPI coating of Golgi vesicle |
| InterPro families | IPR008968 Clathrin adaptor, mu subunit, C-terminal IPR022775 AP complex, mu/sigma subunit IPR011012 Longin-like |
| Orthology group | MCL14707 |
Nucleotide sequence:
ATGTCAAAACAGCAACATAATATAGAATTGTACGTGCACATACGTATGGTGCTATCTACT
GTAGTTCTTACTAAGTTCGGTAAATCTTGGGGGTCCTCCTGCAAGATAGGGGACGTAAGG
AGGGGGTCTCGGTCTCCTGATCGAGGAGCACCCCGCTCAGAACGATTACGGCACGCTTCA
CATCTCTTCATTTCTACACATGTACTTATAGCTGCAACAGTGTGCACGAAATCGGGGAAA
GCGCTAGTTTCTCGTCAATTCGTTGAAATGACGAAAGCACGTATAGAAGGGCTTCTGGCT
GCCTTTCCTAAATTAATGACAGGCGGCCGCCAGCATACTTTTATAGAGACAGAATCTGTA
CGTTATGTCTACCAGCCATTAGACAAGCTTTACATGTTGTTAATTACTACAAAGGCGAGT
AACATTCTAGAAGACTTGGAAACACTGAGACTCTTCAGTAGAGTGGTGCCAGAATATTGC
ACCCAATTGACGGAAGCTGAAATTTTGAACCAGGCCTTCAATCTGCTGTTTGCTTTTGAC
GAAATTGTCGCTCTCGGCTACAGGGAAAGTGTTAACTTGGCTCAGGTTCGCTCGTTCGTC
GAGATGGATTCACACGAGGAGAAGATCTATCAGGCTGTGAGGCAGGTCAGTAGCTACAAA
TTTATATATCGTAATAAAAATTTGCCATCCAACCTTTTTGATAAAGCGACTGCTTCACCG
CCGAGATCCTCTGGTTTTGGAAGCGGTTTCGGTAGTTCGTCCCTACCACAGACAACTCCC
TCTGAGCCGACGACAGAGAAAATACCAACAACACCTGCCAGGGAAACTCGTACCACAACC
CGTTCGGCCATGAAGCTCGGATCTCGAGGCACGGATACAGAGAGCTTCGTATCTCGTCTC
AGAAGCGAAGGAGACGTAGCAGCAGCCCCGGTCAAGATAGAGAAGACGGTTGTTACGACT
AATAACAAGGACGTACATTTGAGATTTGAGGAGAGATTGAATCTGGTGGCCGGCAGAGAT
GGTGATATACAGAGCTTTGAACTTTCTGGATTGCTCACTCTGCGTATATCAAATGAGCAG
TTTGGAAAGATACAAGTTCATGTTGACAACAAAGACACGAGACCTCTTCAGCTACAGACT
CATCCTAATGTGGACAAGGAACATTTCCGTACATCGGGTGTGGTCCGCCTGAAGGCGGCT
CAGCGCGCCTTCCCAGTCAACAGCGACGTCGGTGTACTGAAGTGGCGCCTCGCCAACACT
GGGGACACGCCACAACCACTGTCAGTAAACTGCTGGCCGTCAGAGGGCGCTAACGGCACT
TGTGACGTCAATATAGAATATGAATTGGAGCAAGAACATTTGGCACTGGCCGATGTTAAC
ATCAATATCCCACTACCCGCTGGTAACACTACACTAGTAGTTCACCAATGGGAGGGAAGT
TATACACAGAAGGGTAAAATGTTGGTGTGGAACATTCCGCTCATTAACAAACAACAGAAG
TCCGGCACACTTGAGTTTACCGTCACTCCCGCTATTCGCAATGACTTTTTCCCGCTATCT
GTCACTTGGACGTCTGAGACGCCGCTCGCTATGCTGACCGCCACTAAAGTGACAACAGCC
GAAGAAGGCAACAATGTAGATTTCTCACAGGAAATATCATTCCATCCTGATAAATATGAA
ATTGTATAA
Protein sequence:
MSKQQHNIELYVHIRMVLSTVVLTKFGKSWGSSCKIGDVRRGSRSPDRGAPRSERLRHAS
HLFISTHVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFIETESV
RYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCTQLTEAEILNQAFNLLFAFD
EIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQVSSYKFIYRNKNLPSNLFDKATASP
PRSSGFGSGFGSSSLPQTTPSEPTTEKIPTTPARETRTTTRSAMKLGSRGTDTESFVSRL
RSEGDVAAAPVKIEKTVVTTNNKDVHLRFEERLNLVAGRDGDIQSFELSGLLTLRISNEQ
FGKIQVHVDNKDTRPLQLQTHPNVDKEHFRTSGVVRLKAAQRAFPVNSDVGVLKWRLANT
GDTPQPLSVNCWPSEGANGTCDVNIEYELEQEHLALADVNINIPLPAGNTTLVVHQWEGS
YTQKGKMLVWNIPLINKQQKSGTLEFTVTPAIRNDFFPLSVTWTSETPLAMLTATKVTTA
EEGNNVDFSQEISFHPDKYEIV