| New model in OGS2.0 | DPOGS205877 |
|---|---|
| Genomic Position | scaffold1969:+ 17843-20556 |
| See gene structure | |
| CDS Length | 1215 |
| Paired RNAseq reads | 1694 |
| Single RNAseq reads | 3923 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000119 (9e-147) |
| Best Drosophila hit | lethal (3) 02640 (5e-94) |
| Best Human hit | porphobilinogen deaminase isoform 1 (3e-79) |
| Best NR hit (blastp) | PREDICTED: similar to porphobilinogen deaminase [Tribolium castaneum] (6e-102) |
| Best NR hit (blastx) | porphobilinogen deaminase [Aedes aegypti] (7e-95) |
| GeneOntology terms | GO:0004418 hydroxymethylbilane synthase activity GO:0018160 peptidyl-pyrromethane cofactor linkage GO:0033014 tetrapyrrole biosynthetic process |
| InterPro families | IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase IPR022418 Porphobilinogen deaminase, C-terminal domain IPR022417 Porphobilinogen deaminase, N-terminal |
| Orthology group | MCL12385 |
Nucleotide sequence:
ATGGAAAGTGAACGGAAAAATGTAGTTCGTGTTGGTTCGAGAAAAAGCGAGTTAGCGCTT
ATTCAAACTAACTTTGTGATAGACAGCTTAAAGAAAATCTATCCAGATAAAGAATTCACC
ATAGTTTCGATGACAACATTAGGTGACAGAGTGTTAGATATCTCGTTACCAAAAATAGGT
GAAAAATCGTTATTCACTAAAGACCTAGAGGAAGCCTTAAGGAACAACACTGTCGATTTT
GTTGTGCATTCGTTAAAAGACTTGCCAACTACCTTACCAGAGGGTCTTGCTATTGGCGCT
GTGTTTGAAAGAGAAGATCCCCGAGATGCTCTCGTACTAAGAGAAGACATCAAAGAAGCG
ACACTCAGTGCTTTGCCGGCTGGATCTATCATAGGAACATCATCTTTACGTCGAACAGCA
CAGCTTAGAGGGAGTTATCCCGAACTGTCGGTGCAAGATGTCAGAGGAAACCTTAATACA
AGATTGAAGAAATTAGATAGCGGAGCATATTCTGCATTACTGCTAGCGACTGCCGGATTA
GAAAGAATGGGCTGGGAAAAACGAATCACTAAGATTCTTCCGTGTTCTGAGATGATGTAC
GCTGTAGGTCAAGGTGCCCTCGCAGTGGAATGTCGGTCGGATAATGCTGAAATTTTAACA
TTATTATCCCCGTTCAATCATGTAGAGACATATTGTAGAGTATTGGCCGAGAGGAGCTTC
TTGAAAACATTGGGTGGTGGTTGCAGTGCACCAGTCGGTGTGTCAACAAAGTTAAAAGCT
TTGGATTCTGATTGGAAACTAAGTATAACAGGTGGAGTATGGAGTTTGGATGGAAAAACA
AAAGTAACGGACACATTGGAAAAGACATTTACACAAATTAAAAAGTCACAAAAACACAAA
CTAAGTCCTACTGAAGATAATATGAACAAAAAAATTAAAATTGATGATAATAACGACAAT
ATTACGCATCCACTAGCTGAATTAGACAATATAATAGAAAAGAACAACGGAAATTTAAAT
TGTGAGGAATCATCCAAGGAGATAACATGCAGGCTATTCTGCGGTCTGATTGAAAATAAT
AATATACCAGTAGACGTGATTATGAAATGTGAAGATCTTGGCAAAGAATTAGCTAATAAT
TTAATAACAAACGGTGCTTTGGATGTTATGAAAGTAACACAGGATCTTATAAGGAATTCG
ATAAAAAGTTCATGA
Protein sequence:
MESERKNVVRVGSRKSELALIQTNFVIDSLKKIYPDKEFTIVSMTTLGDRVLDISLPKIG
EKSLFTKDLEEALRNNTVDFVVHSLKDLPTTLPEGLAIGAVFEREDPRDALVLREDIKEA
TLSALPAGSIIGTSSLRRTAQLRGSYPELSVQDVRGNLNTRLKKLDSGAYSALLLATAGL
ERMGWEKRITKILPCSEMMYAVGQGALAVECRSDNAEILTLLSPFNHVETYCRVLAERSF
LKTLGGGCSAPVGVSTKLKALDSDWKLSITGGVWSLDGKTKVTDTLEKTFTQIKKSQKHK
LSPTEDNMNKKIKIDDNNDNITHPLAELDNIIEKNNGNLNCEESSKEITCRLFCGLIENN
NIPVDVIMKCEDLGKELANNLITNGALDVMKVTQDLIRNSIKSS