| New model in OGS2.0 | DPOGS210318 |
|---|---|
| Genomic Position | scaffold113:+ 96463-98739 |
| See gene structure | |
| CDS Length | 843 |
| Paired RNAseq reads | 2755 |
| Single RNAseq reads | 8630 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011599 (2e-102) |
| Best Drosophila hit | lethal (1) G0320 (3e-61) |
| Best Human hit | translocon-associated protein subunit alpha precursor (8e-48) |
| Best NR hit (blastp) | signal sequence receptor [Bombyx mori] (2e-133) |
| Best NR hit (blastx) | signal sequence receptor [Bombyx mori] (7e-105) |
| GeneOntology terms | GO:0005785 signal recognition particle receptor complex GO:0005048 signal sequence binding GO:0005811 lipid particle GO:0045169 fusome |
| InterPro families | IPR005595 Translocon-associated protein (TRAP), alpha subunit |
| Orthology group | MCL17421 |
Nucleotide sequence:
ATGAAACTATTTTTTATTACGTTATTGGTTCTACCGGCACTACTCTGCTTCCAAAGCTCC
AGCACAATATTTGCTAGAGCAGATGAGGATGAACTTGATGATGTAGTGGACATTGAGGGT
GAAGACAACCAGGTGGTGGGAGACGACGCTCTTGGTGATGACGATGATTCAATTGTTAAA
TCATCACAAGATGTTGACACAACTATACTGTTCATGAAACCCATCACCAGTTATGGTGAT
GTGGCATTCGATCTTCAAGCTGGCTACCCTGTTGAGTTCCTCGTTGGCTTCATTAACAAG
GGCTCTGAAGACTACATCGTTGAGACTATGGAGGCCTCTTTCCGTTATCCCATGGACTAC
AACTATTACATTCAGAATTTCACAGCACTACCTTACTACAGAGAGGTCAAGCCTAAACAA
GAGGCTACATTCGCTTACTCATTCATCCCCAACGAGGCTTATGCCGGACGTCCATTCGGA
CTTAACATTCAGCTCAACTATAGAGACGCCAGCGGAAACTACTATCAGGAAGCCGTATAC
AACCAGACAATCAACATTGTCGAAGTATCCGAAGGACTTGATGGAGAGACATTTTTCTTG
TATGTCTTCCTTGGTGCAGCCTGTGTGTTGACTTTAGTTCTTGGACAACAAGCATTATCT
TCACTCGCAAGAAGATCAAGGTCCCCACGATCCGTGTCTAAGCCCATTGAGACCGGAACT
GCCACTAATGTCGACTATGACTGGTTGCCAAAGGATGTGGCTAACCAACTTAAAAAATCA
CCCAAAACCCCCAAACAGTCACCACGCGCGAGGAAAGCGAAAAGATCTGCCGGCGATGAT
TAG
Protein sequence:
MKLFFITLLVLPALLCFQSSSTIFARADEDELDDVVDIEGEDNQVVGDDALGDDDDSIVK
SSQDVDTTILFMKPITSYGDVAFDLQAGYPVEFLVGFINKGSEDYIVETMEASFRYPMDY
NYYIQNFTALPYYREVKPKQEATFAYSFIPNEAYAGRPFGLNIQLNYRDASGNYYQEAVY
NQTINIVEVSEGLDGETFFLYVFLGAACVLTLVLGQQALSSLARRSRSPRSVSKPIETGT
ATNVDYDWLPKDVANQLKKSPKTPKQSPRARKAKRSAGDD