| New model in OGS2.0 | DPOGS204483 |
|---|---|
| Genomic Position | scaffold1084:+ 6209-9524 |
| See gene structure | |
| CDS Length | 1215 |
| Paired RNAseq reads | 231 |
| Single RNAseq reads | 773 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007825 (0.0) |
| Best Drosophila hit | carmine (0.0) |
| Best Human hit | AP-3 complex subunit mu-1 (1e-164) |
| Best NR hit (blastp) | PREDICTED: similar to GA15778-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to GA15778-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006727 ommochrome biosynthetic process GO:0030131 clathrin adaptor complex GO:0016183 synaptic vesicle coating GO:0030135 coated vesicle GO:0007269 neurotransmitter secretion GO:0006901 vesicle coating GO:0008021 synaptic vesicle GO:0007040 lysosome organization GO:0046907 intracellular transport GO:0005515 protein binding GO:0006886 intracellular protein transport GO:0016192 vesicle-mediated transport GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome GO:0005634 nucleus GO:0008340 determination of adult lifespan |
| InterPro families | IPR018240 Clathrin adaptor, mu subunit, conserved site IPR001392 Clathrin adaptor, mu subunit IPR008968 Clathrin adaptor, mu subunit, C-terminal IPR011012 Longin-like |
| Orthology group | MCL11692 |
Nucleotide sequence:
ATGATTCACAGTTTATTTATTATAAATCCTGCTGGAGATGTGTTTTTAGAAAAGCATTGG
CGAAGTGTTATTCCTAGATCAGTATGTGATTATTACTTAGAAGCTCAGAGAGCTTCGCCT
AATGATGTCCCTCCAGTGATAGCTGCCCCCCATCATTATTTAATTTCAATTCAGAGAGGA
GGTGTTGCCCTAGTGGCTGTTAGCAAACAAGAGGTGCCTCCTCTTTTTGTTATTGAATTC
CTACATAGAGTTGTGGATACATTCCAGGATTACTTTTCTGATTGCACTGAAACAATTATT
AAGGAGAACTATGTTGTTGTTTATGAGCTGTTGGATGAGATGTTAGACAATGGTTTTCCA
TTGGCCACCGAGAGCAACATTTTGAAGGAATTGATAAAACCACCTAATATATTTAGAACA
ATAGCCAACACTGTGACAGGCAAATCAAATGTATCATCAATATTACCTGGTGGACAACTT
TCTAATGTGCCATGGCGTAGAACGGGAGTCAAGTATGCTAATAATGAAGCGTACTTTGAT
GTTATTGAGGAAGTTGATGCAATTATAGATAAAAGTGGATCTACTGTATCTGCTGAAATA
CAGGGATATATTGACTGCTGTATCAAGCTGAGTGGTAAGCCAGATCTGACCTTGTCATTC
GTGAATCCAAGGCTGTTTGATGATGTATCTTTCCACCCTTGTGTGAGATTTAAAAGATGG
GAGTCTGAAAGAATATTATCTTTCATACCACCGGATGGTAACTTCAGACTGATGTCATAT
CACATTGGTTCACAAAGTGTTGTGGCAATTCCTATCTATGTGAGACATAATCTATCATTA
CGAACCAATGGGGATCAAGGGCGATTTGACATGACTGTTGGTCCTAAACAAACCATGGGC
AGGACCTTGGAAAATGTAGCCTTAGAGATCTGTATGCCAAAATGTGTTCTCAACTGTTCA
CTAACTGCTAATCAAGGAAAATATTCATATGATCCGGTTAGTAAAGTATTGTTGTGGGAC
ATTGGACGTATTGAACTACCGAAGTTGCCGAATATACGAGGAACTGTGTCCCTAGCATCA
GTTCACTTTACTATACCCCAATTAGCGGTGAGCGGTTTGAGAGTCAGTCGGCTTGATATG
TACGGAGCTAAATACAAGCCGTTCAAAGGTGTCAAATATGTCACCAAGGCTGGCAAGTTC
CATGTTAGAATGTAA
Protein sequence:
MIHSLFIINPAGDVFLEKHWRSVIPRSVCDYYLEAQRASPNDVPPVIAAPHHYLISIQRG
GVALVAVSKQEVPPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGFP
LATESNILKELIKPPNIFRTIANTVTGKSNVSSILPGGQLSNVPWRRTGVKYANNEAYFD
VIEEVDAIIDKSGSTVSAEIQGYIDCCIKLSGKPDLTLSFVNPRLFDDVSFHPCVRFKRW
ESERILSFIPPDGNFRLMSYHIGSQSVVAIPIYVRHNLSLRTNGDQGRFDMTVGPKQTMG
RTLENVALEICMPKCVLNCSLTANQGKYSYDPVSKVLLWDIGRIELPKLPNIRGTVSLAS
VHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM