| New model in OGS2.0 | DPOGS214229 |
|---|---|
| Genomic Position | scaffold323:- 1173-7553 |
| See gene structure | |
| CDS Length | 1809 |
| Paired RNAseq reads | 113 |
| Single RNAseq reads | 455 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005954 (3e-83) |
| Best Drosophila hit | CG33966 (3e-71) |
| Best Human hit | alpha-tocopherol transfer protein-like (3e-24) |
| Best NR hit (blastp) | AGAP012165-PA [Anopheles gambiae str. PEST] (1e-89) |
| Best NR hit (blastx) | AGAP012165-PA [Anopheles gambiae str. PEST] (7e-87) |
| GeneOntology terms | GO:0008431 vitamin E binding |
| InterPro families | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR011074 Phosphatidylinositol transfer protein-like, N-terminal |
| Orthology group | MCL18138 |
Nucleotide sequence:
ATGTCTCTACGACAATTGTGTCCCGAATTAGCCGAAAAGGCTAAGTTGGAATTAAATGAA
GATCCAAAAACTATTGAGGGCGACATACAGCATATAAAGGACTGGTTGGCTAAGCAACCA
CACCTGAAAGTAAGAACAGATGACCAATGGTTGCTCGCTTTTATTAGAGGATGTAAGCAC
AGTCTCGAAAGGACTAAAGAGAAGTTGGATCTGTTTTACACATTACGAACAGTAGCACCG
GAGATTTACAAAGTGAAACATAATGAACCTCTATTCAATACAATCATGGATCTGGGGAGT
TACTTGATATTGCCAAAGTTGGAAAAGCCGGATTCACCTCGGATTGCTCTTATTCGGCCT
GGAATGTACAATCCAGATAAATTTTCTTTTTTCGATATATTCTCTTGTGGTGCTGTATTT
CAAAATATTCTGATGTACGAAGATGATGCCATAGTTATATCTGGGCTTACAACCCTTATA
GACTTAGAGAGTGTAACAATGGGTCATTTGTTGCAACTCACACCGAGTGTTATGAAAAAG
ATGGTCGTTTACACCCAGGATGCTCTTCCAATCCGCATGAAAGGCGTTCACTATATTAAC
ACTCCTCCAGGCTTCGAAACGGTATTCAACGCAATTAAGTCGTTGCTTAATGAGAAGAAT
AGAAACAGGTTGTATGTACACAACAAAAATTATAATGAATTATACAAACACATCTCCCAG
GAGGTTTTACCAGCGGAATATGGAGGAAAAGGTGGCAGCATACAGGAAATTAAGGGATAT
TGGAAGAATAAAATAGACGCATGCAGTTCATATTTGGAAGAAGATCTTAAGAATGGAACT
GATGAATCAAAACGTCCCGGAAAACCAAACACTTCTGAAAACCTATTCGGTCTAGAAGGA
TCTTTCCAGTTAGCCAAAAAGGCACAGGAGGAGTTAAATGAAGATCCGAAAAATATTCAA
CGTGACCTACAATATATTAAGGATTGGTTATCCAAGCAACCTCATTTAAAGGCTAGACTA
GATGATCAGTGGCTTGTCGCTTTTTTAAGAGGATGCAAGTACAGTCTAGAGCGCACGAAA
GAAAAAATAGACCTATATTATTCTATGAGGTCGTTGGCACCAGAACTATTTAGGGTGAAG
GCTACTGATTCTGTTTTTGATGAATTAATCAGTTTGGGGACTTACCTGATACTGCCGAAA
ACCGCTACCCCTGATTCACCGAGGATTATCATAATTCGAGCTGGTTGTTATGATCCCGCT
AAATACAACTTTATTGACATATTCTCTGCTACTGCACACATACAGAAGATTCTCATTTTC
GAAGATGACGCAATTGTTGTATCTGGTTTTAAAACAATTATGGACATGGAAGGCATCACT
CTCGCACACTTATTGCAAATCACGCCCAGCGTTATGAAGAAGATGGCTGTTCTTTCACAG
GACGCCTGGCCGCTACGTATGAAAGGAGCACATTACATTAATACACCGTCATGGTTTGAT
AATTTTTTTAACATGGTTAAAAATTTGTTAAATGAAAAAAATAGACAGCGTCTTTACGTA
CATAATAAAAATTTCGAAGAACTATACAAACATATTCCTCAGGAAATATTACCAAATGAA
TATGGTGGAAATGGTGGTAATATTAAGGAGATTTCAGAATATTGGAAGGCTAAGGTACAA
GAGTATAGCTCGTGGTTAGAAGATGATTTAAAATACGGTTCGGACGAATCAAAGCGAGTG
GGAAACCCAAGGACGGCTGAGACATTGTTTGGGGTCGAGGGTTCTTTCAGACAACTGGAG
TTTGATTAA
Protein sequence:
MSLRQLCPELAEKAKLELNEDPKTIEGDIQHIKDWLAKQPHLKVRTDDQWLLAFIRGCKH
SLERTKEKLDLFYTLRTVAPEIYKVKHNEPLFNTIMDLGSYLILPKLEKPDSPRIALIRP
GMYNPDKFSFFDIFSCGAVFQNILMYEDDAIVISGLTTLIDLESVTMGHLLQLTPSVMKK
MVVYTQDALPIRMKGVHYINTPPGFETVFNAIKSLLNEKNRNRLYVHNKNYNELYKHISQ
EVLPAEYGGKGGSIQEIKGYWKNKIDACSSYLEEDLKNGTDESKRPGKPNTSENLFGLEG
SFQLAKKAQEELNEDPKNIQRDLQYIKDWLSKQPHLKARLDDQWLVAFLRGCKYSLERTK
EKIDLYYSMRSLAPELFRVKATDSVFDELISLGTYLILPKTATPDSPRIIIIRAGCYDPA
KYNFIDIFSATAHIQKILIFEDDAIVVSGFKTIMDMEGITLAHLLQITPSVMKKMAVLSQ
DAWPLRMKGAHYINTPSWFDNFFNMVKNLLNEKNRQRLYVHNKNFEELYKHIPQEILPNE
YGGNGGNIKEISEYWKAKVQEYSSWLEDDLKYGSDESKRVGNPRTAETLFGVEGSFRQLE
FD