| New model in OGS2.0 | DPOGS201045 |
|---|---|
| Genomic Position | scaffold1470:+ 17897-28466 |
| See gene structure | |
| CDS Length | 1800 |
| Paired RNAseq reads | 1486 |
| Single RNAseq reads | 3450 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012488 (0.0) |
| Best Drosophila hit | SP1070, isoform C (0.0) |
| Best Human hit | cubilin precursor (3e-27) |
| Best NR hit (blastp) | PREDICTED: similar to GA21569-PA [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to GA21569-PA [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0005112 Notch binding GO:0007155 cell adhesion GO:0005509 calcium ion binding GO:0004872 receptor activity GO:0016324 apical plasma membrane GO:0035152 regulation of tube architecture, open tracheal system |
| InterPro families | IPR001304 C-type lectin IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR000859 CUB IPR000436 Sushi/SCR/CCP IPR016186 C-type lectin-like IPR016060 Complement control module IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site IPR016187 C-type lectin fold |
| Orthology group | MCL14175 |
Nucleotide sequence:
ATGTTGATAAGGTGTCGTGCGGCGCTGAGTGCCGTTGTGTTGCTCCTAGCTGTGTCTCTT
ACGAAATCCGAGGGAAACCTCTTCACGTGTCCTAATGGCTGGGAACTCAAGGGGCTTAAT
TGTTACAAATTTTTCAATATCAGACATTCTTGGGAAAAAGCGGCTGAATTATGTCGAAGG
TATGGAAGCGAACTAATGGTGATAGATAGTTATACAGAAAATAACATGACTGCAAATATG
GTGCCCCCCAGTCCGAGCAATAGTAACTATTGGCTGGGACTTGCGAGTGTTGACGATTTG
AGAACGAATACTTTAGAGTCCGCAGCTGGAGCCTTAGTCTCTCAGTACGCTGGTTATTGG
GACCTTAAACAGCCTAATCCCAAAAACGGCGAATGCGTCGATGTCCATGTTACAAGCGAA
ACACAATCCTGGGAACTAACAACATGCGAAACACTTCTGCCTTTTATGTGCAAGGCTAAC
GCATGCCCGGCAGGAACCTTCCATTGTTCAAACGGAAGATGTATCAATGCAGCCTTCAAA
TGTGACAAGCAAGATGATTGTGGCGACGGATCGGATGAAATGGATTGTGCTGGCGACTGT
CATTTTTATATGGCCAGCAGTGGTGATGTCGTAGAAAGTCCCAACTATCCTCATAAATAT
CTTCCCTTCAGCGACTGTAAATGGACACTTGAAGGACCTCAAGGACAAAATATAGTTTTG
CAGTTCCAAGATTTTGAAACTGAAAAGTCTTTCGATACTGTTCAAATCTTAGTTGGTGGT
CGAACCGAAGATAAATCTGTGAACCTAGCAACTTTATCAGGAAAACAAGATTTATCTAGC
AAACTTTATGTATCTGCTTCTAATTTTATGATAATTAAGTTTACTTCTGACGGATCCGTA
GAGCGTAAAGGTTTCCGTGCATCATGGAAAACTGAATCTTCAAACTGTGGAGGAATTTTA
AGAGCAACACCTCAAGGCCAAGTACTCAATTCTCCTGGTTATCCAAATAGTTATCCTGGG
GGATTAGAATGCATGTATATTATTGAAGCGCAACCGGGCAGAATTGTTTCCTTAGAGATA
GAAGATTTAGATTTGGAAATGAACAGAGATTATATAGTAATAAAAGATGGAAACACACCA
TCAAGTCCTGTTTTAGCGAGATTAACTGGTGCTGGTGAAGATAACGAAAAGGTGGTCATA
TCCACTACTAATCACTTATACATGTACTTCCGAACAAGTCTAGGTGATTCTAAGAAAGGA
TTCAACATGAGATATTCGCAAGGATGTAGAGCAACCATAATAGCAGCTAACGGAACATTT
AACTCTCCAGCATTTGGTCTAAGCAATTATCCTAATAATCAGGAATGTTTATATCGTCTT
AAAAATCCGAACGGTGGTCCTCTTTCTTTGAAGTTTGATGAATTCAGCATACATCCCTCC
GATATAGTACAAGTATTTGACGGGGCTAGTACAGGTGGACTACGTTTACATTCAGATAAT
GGATTCACAGTAAAGCCAAGAATAACTTTGACTGCCTCAAGCGGTGAAATGTTAATAAGA
TTTATATCCGACGCCGTCCATAATGGTGTTGGTTGGAAAGCAACATTTTCTGCAGACTGC
CCACCTCTTAAACCTGGAATTGGTGCATTGGCATCTAATAGAGATACAGCTTTTGGAACA
ACTATAACATTTTCGTGTCCTATTGGCCAGGAATTTGCAACTGGTAAAGCAAGAATTACA
ACCAAATGTTTAGATGGTGGTAAATGGTCCACAACGTATATTCCCAGTTGTCAAGGTTAG
Protein sequence:
MLIRCRAALSAVVLLLAVSLTKSEGNLFTCPNGWELKGLNCYKFFNIRHSWEKAAELCRR
YGSELMVIDSYTENNMTANMVPPSPSNSNYWLGLASVDDLRTNTLESAAGALVSQYAGYW
DLKQPNPKNGECVDVHVTSETQSWELTTCETLLPFMCKANACPAGTFHCSNGRCINAAFK
CDKQDDCGDGSDEMDCAGDCHFYMASSGDVVESPNYPHKYLPFSDCKWTLEGPQGQNIVL
QFQDFETEKSFDTVQILVGGRTEDKSVNLATLSGKQDLSSKLYVSASNFMIIKFTSDGSV
ERKGFRASWKTESSNCGGILRATPQGQVLNSPGYPNSYPGGLECMYIIEAQPGRIVSLEI
EDLDLEMNRDYIVIKDGNTPSSPVLARLTGAGEDNEKVVISTTNHLYMYFRTSLGDSKKG
FNMRYSQGCRATIIAANGTFNSPAFGLSNYPNNQECLYRLKNPNGGPLSLKFDEFSIHPS
DIVQVFDGASTGGLRLHSDNGFTVKPRITLTASSGEMLIRFISDAVHNGVGWKATFSADC
PPLKPGIGALASNRDTAFGTTITFSCPIGQEFATGKARITTKCLDGGKWSTTYIPSCQG