| New model in OGS2.0 | DPOGS201094 |
|---|---|
| Genomic Position | scaffold1462:+ 16005-16809 |
| See gene structure | |
| CDS Length | 480 |
| Paired RNAseq reads | 540 |
| Single RNAseq reads | 2936 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007159 (1e-57) |
| Best Drosophila hit | lethal (1) G0156, isoform B (2e-46) |
| Best Human hit | isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial precursor (2e-31) |
| Best NR hit (blastp) | GI16435 [Drosophila mojavensis] (9e-49) |
| Best NR hit (blastx) | GM22739 [Drosophila sechellia] (1e-46) |
| GeneOntology terms | GO:0005759 mitochondrial matrix GO:0004449 isocitrate dehydrogenase (NAD+) activity GO:0005739 mitochondrion GO:0006099 tricarboxylic acid cycle GO:0051287 NAD or NADH binding GO:0000287 magnesium ion binding GO:0055114 oxidation reduction GO:0005811 lipid particle GO:0005875 microtubule associated complex |
| InterPro families | IPR001804 Isocitrate/isopropylmalate dehydrogenase |
| Orthology group | ND |
Nucleotide sequence:
ATGTCGAAGAATTACATAAATGCTCTTTTGAAGCCTTTTCGTGAGAATAAAGTTGTATCA
AGTATACTAAAATTATTCGAGTCGGGCTCAAATAATCCTTCGGGAGGGGTTGTGGGTGTG
AAAAATGAGATCCCCGCGGGCCGGGCTGGTTCCGCTCAATACAGCACGGGGGTCCGTAAG
GTGACACTCATCCCTGGACACGGGATCGGCCCCGAGATCACGGTAGCTGTACAGAAAATA
TTCGAAGCCGCCAAAGTACCCATTGAATGGGACGAGGTGGACGTGACAGCTGTTAGAGGT
CCGGATGGCAAATTCGGTATTCCCCAACGTGCCATTGATTCTGTCAATGCCAACAAGATA
GGCCTCAAAGGTCCCCTGATGACCCCAGTGGGTAAAGGATACAGGTCGTTGAACTTGGCT
TTAAGAAAAGAGTTTGATCTGTATGCCAATGTGAGGCCTTGCAAGAGTTTAGACGGGTGA
Protein sequence:
MSKNYINALLKPFRENKVVSSILKLFESGSNNPSGGVVGVKNEIPAGRAGSAQYSTGVRK
VTLIPGHGIGPEITVAVQKIFEAAKVPIEWDEVDVTAVRGPDGKFGIPQRAIDSVNANKI
GLKGPLMTPVGKGYRSLNLALRKEFDLYANVRPCKSLDG