| New model in OGS2.0 | DPOGS200448 |
|---|---|
| Genomic Position | scaffold1672:- 21741-25907 |
| See gene structure | |
| CDS Length | 1167 |
| Paired RNAseq reads | 9182 |
| Single RNAseq reads | 21977 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011412 (4e-180) |
| Best Drosophila hit | CG5028, isoform D (3e-126) |
| Best Human hit | isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial isoform a precursor (4e-87) |
| Best NR hit (blastp) | isocitrate dehydrogenase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | isocitrate dehydrogenase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0004449 isocitrate dehydrogenase (NAD+) activity GO:0005759 mitochondrial matrix GO:0005739 mitochondrion GO:0006099 tricarboxylic acid cycle GO:0051287 NAD or NADH binding GO:0055114 oxidation reduction GO:0000287 magnesium ion binding GO:0005875 microtubule associated complex |
| InterPro families | IPR001804 Isocitrate/isopropylmalate dehydrogenase IPR004434 Isocitrate dehydrogenase NAD-dependent |
| Orthology group | MCL14415 |
Nucleotide sequence:
ATGGCAGTGAGGTTGCTCTCGAAAGTGAAATGCCTGCCTGGGATACAGGGAGTGGTATAC
GCTAGTGGGGCGGCTGCTCCAGCTCAGCTTTCAGATTTTGAGTTACAGCATAAGACGCCA
GTAATTCGTAAGCAGAAGAACATCCCCATAGCTCAGTACGGAGGCCGTCATGCCGTCACC
ATGCTCCCTGGTGGTGGAATCGGCCCTGAATGCATGGGCTACGTCAGGGAAATTTTCAAG
TACATCGGTGCCCCCATAGACTTTGAACTTGTGAATATTGATCCTAATGTAGACAATGAT
GACGACGTCCAATATGCCATCACCACCATCAAGAGGAATGGTGTCGGACTTAAGGGTAAT
ATTGAGACTAAGAGCGAGGCAGCGTACGTAACTTCACGTAATGTTGCGTTACGTAACGAG
TTAGACATGTACGCATATGTTTTGAACTGCAAATCATTTCCCGGAGTCAGCACCAGGCAC
AAGGATATTGACATCGTTATTATAAGACAGAACACAGAAGGTGAATATGCCATGTTGGAA
CATGAATCTGTTAGGGGGGTGATTGAATCGATGAAGGTGGTCACAGCGAGCAACTCGGAG
AGGGTTGCCAGATTCGCTTTTGAATTTGCCAAGAGGAATGGAAGGAAGAAGGTAACGACT
GTCCACAAAGCGAATATCATGAAGCTATCAGATGGGCTGTTCCTGGAGACATCCCGTCGT
TTGGCTCAAGAGTATCCGGACATAGAACATAATGATATGATCATTGACAACTGTTGTATG
CAACTTGTTGCCAGGCCGCACCAGTTTGACGTGATGTTGATGACAAATCTGTATGGATCA
ATTGTCTCTAACGTGGTTTGTGGTCTACTCGGAGGAGCTGGTTTACTCTCCGGGAGGAAT
TATGGTGACAACTACGCAGTCTTTGAACCTGGCACTAGGAATACTGGTACAGCCATAGCT
GGCAAGAACATTGCTAACCCAATAGCCATGATAAACGCCTCGGTGGACATGTTGGAGCAC
CTCGGACACCATTATCATGCCGGTTTGATCAGGAGAGCGTTGGATAAAACTATTAATACC
GATAGAGTGCTCACCCCTGACTGCGGAGGAACAGCCAGTTCCAGTGAAGTGGTTGACAGC
ATCATGCAGAATATTGGCCGCTGCTAG
Protein sequence:
MAVRLLSKVKCLPGIQGVVYASGAAAPAQLSDFELQHKTPVIRKQKNIPIAQYGGRHAVT
MLPGGGIGPECMGYVREIFKYIGAPIDFELVNIDPNVDNDDDVQYAITTIKRNGVGLKGN
IETKSEAAYVTSRNVALRNELDMYAYVLNCKSFPGVSTRHKDIDIVIIRQNTEGEYAMLE
HESVRGVIESMKVVTASNSERVARFAFEFAKRNGRKKVTTVHKANIMKLSDGLFLETSRR
LAQEYPDIEHNDMIIDNCCMQLVARPHQFDVMLMTNLYGSIVSNVVCGLLGGAGLLSGRN
YGDNYAVFEPGTRNTGTAIAGKNIANPIAMINASVDMLEHLGHHYHAGLIRRALDKTINT
DRVLTPDCGGTASSSEVVDSIMQNIGRC