New model in OGS2.0 | DPOGS200888  |
---|---|
Genomic Position | scaffold5:- 631146-631723 |
See gene structure | |
CDS Length | 492 |
Paired RNAseq reads   | 10 |
Single RNAseq reads   | 58 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003924 (4e-79) |
Best Drosophila hit   | NADH:ubiquinone reductase 23kD subunit precursor (6e-75) |
Best Human hit | NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor (1e-71) |
Best NR hit (blastp)   | NADH dehydrogenase ubiquinone Fe-S 8 [Bombyx mori] (3e-80) |
Best NR hit (blastx)   | NADH dehydrogenase ubiquinone Fe-S 8 [Bombyx mori] (4e-80) |
GeneOntology terms    | GO:0005747 mitochondrial respiratory chain complex I GO:0008137 NADH dehydrogenase (ubiquinone) activity GO:0006120 mitochondrial electron transport, NADH to ubiquinone GO:0003954 NADH dehydrogenase activity GO:0009055 electron carrier activity GO:0051539 4 iron, 4 sulfur cluster binding |
InterPro families    | IPR012285 Fumarate reductase, C-terminal IPR010226 NADH-quinone oxidoreductase, chain I IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPR001450 4Fe-4S binding domain IPR017896 4Fe-4S ferredoxin, iron-sulpur binding domain |
Orthology group | ND |
Nucleotide sequence:
ATGGGTGATTTTGTAGATAGAATCGCTCAAACTGTGTTTTGGACTGAATTAGCTAGAGGC
TTTGCTGTAACCATTGCCCATATATTTAAAGAACCTGCAACCATAAACTATCCATTCGAG
AAAGGTCCACTGTCTCCTCGATTCCGAGGTGAACATGCATTGCGAAGGTATCCGTCCGGA
GAAGAAAGGTGTATTGCTTGTAAACTATGTGAAGCCTATTGTCCCGCGCAAGCGATAACA
ATAGACGCTGAAGAAAGGAACGATGGTTCTCGTAGAGCAATACGTTATGATATTGACCTA
ACCAAGTGTATTTTTTGTGGATACTGTCAGGAAGCTTGCCCAGTAGATGCTATTGTCGAA
GGCCCTAATTTTGAGTATTCAACAGAAACACATGAGGAACTTATGTACAATAAAGAAAAA
TTGCTAAGTAATGGAGACCGTTGGGAACCTGAAATAGTTAGCAACTTGAGGGACAATTTC
CTATATCGTTGA
Protein sequence:
MGDFVDRIAQTVFWTELARGFAVTIAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSG
EERCIACKLCEAYCPAQAITIDAEERNDGSRRAIRYDIDLTKCIFCGYCQEACPVDAIVE
GPNFEYSTETHEELMYNKEKLLSNGDRWEPEIVSNLRDNFLYR