| DPOGS200888 | ||
|---|---|---|
| Transcript | DPOGS200888-TA | 492 bp |
| Protein | DPOGS200888-PA | 163 aa |
| Genomic position | DPSCF300066 - 639664-640241 | |
| RNAseq coverage | 55x (Rank: top 69%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007977 | 1e-87 | 89.57% | |
| Bombyx | BGIBMGA003924-TA | 4e-83 | 87.34% | |
| Drosophila | ND23-PA | 4e-79 | 82.21% | |
| EBI UniRef50 | UniRef50_O00217 | 5e-74 | 76.69% | NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=157 Tax=cellular organisms RepID=NDUS8_HUMAN |
| NCBI RefSeq | NP_001040316.1 | 2e-81 | 86.71% | NADH dehydrogenase ubiquinone Fe-S 8 [Bombyx mori] |
| NCBI nr blastp | gi|114051372 | 4e-80 | 86.71% | NADH dehydrogenase ubiquinone Fe-S 8 [Bombyx mori] |
| NCBI nr blastx | gi|114051372 | 6e-80 | 86.71% | NADH dehydrogenase ubiquinone Fe-S 8 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016020 | 6.9e-49 | membrane | |
| GO:0016651 | 6.9e-49 | oxidoreductase activity, acting on NADH or NADPH | ||
| GO:0051539 | 6.9e-49 | 4 iron, 4 sulfur cluster binding | ||
| GO:0055114 | 6.9e-49 | oxidation-reduction process | ||
| GO:0051536 | 8.7e-24 | iron-sulfur cluster binding | ||
| GO:0016491 | 8.7e-24 | oxidoreductase activity | ||
| KEGG pathway | cqu:CpipJ_CPIJ018590 | 2e-80 | ||
| K03941 (NDUFS8) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [20-141] IPR010226 | 6.9e-49 | NADH-quinone oxidoreductase, chain I | |
| [21-140] IPR012285 | 8.7e-24 | Fumarate reductase, C-terminal | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200888-TA
ATGGGTGATTTTGTAGATAGAATCGCTCAAACTGTGTTTTGGACTGAATTAGCTAGAGGCTTTGCTGTAACCATTGCCCATATATTTAAAGAACCTGCAACCATAAACTATCCATTCGAGAAAGGTCCACTGTCTCCTCGATTCCGAGGTGAACATGCATTGCGAAGGTATCCGTCCGGAGAAGAAAGGTGTATTGCTTGTAAACTATGTGAAGCCTATTGTCCCGCGCAAGCGATAACAATAGACGCTGAAGAAAGGAACGATGGTTCTCGTAGAGCAATACGTTATGATATTGACCTAACCAAGTGTATTTTTTGTGGATACTGTCAGGAAGCTTGCCCAGTAGATGCTATTGTCGAAGGCCCTAATTTTGAGTATTCAACAGAAACACATGAGGAACTTATGTACAATAAAGAAAAATTGCTAAGTAATGGAGACCGTTGGGAACCTGAAATAGTTAGCAACTTGAGGGACAATTTCCTATATCGTTGA
>DPOGS200888-PA
MGDFVDRIAQTVFWTELARGFAVTIAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAYCPAQAITIDAEERNDGSRRAIRYDIDLTKCIFCGYCQEACPVDAIVEGPNFEYSTETHEELMYNKEKLLSNGDRWEPEIVSNLRDNFLYR-