| New model in OGS2.0 | DPOGS204438 |
|---|---|
| Genomic Position | scaffold381:- 127278-144641 |
| See gene structure | |
| CDS Length | 5322 |
| Paired RNAseq reads | 4897 |
| Single RNAseq reads | 11451 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013573 (6e-10) |
| Best Drosophila hit | Cad87A (0.0) |
| Best Human hit | cadherin-23 isoform 1 (4e-114) |
| Best NR hit (blastp) | PREDICTED: similar to Cad87A CG6977-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Cad87A CG6977-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005887 integral to plasma membrane GO:0016339 calcium-dependent cell-cell adhesion GO:0016021 integral to membrane GO:0007156 homophilic cell adhesion GO:0005509 calcium ion binding GO:0005886 plasma membrane |
| InterPro families | IPR002126 Cadherin IPR020894 Cadherin conserved site IPR015919 Cadherin-like |
| Orthology group | MCL10398 |
Nucleotide sequence:
ATGGCTGCCGGTGTTCTGGACAGCTCTGATCTGCTTACGATAAAATATGGTTTAGTTGGC
ACGGACAAGTTTGCTGTGAATTCAGATACGGGGAATGTGACTCTTATACAGCCTTTGGAC
AGAGAGAAAGAAGACACAATAAAATTCCTCGTGTCCCTTGAGAACAGCGACCCTGGGTCA
GGTCAGACCCTGGTCCAGACTCAGTCCGTCACCGTCATCATAGTTGACGAAAATGATAAC
CCACCACTCTTCAAGAATAGTCCCTACGAAGTTAATGTGGCGGAGGACGAAGTTGTTGGG
ACGACGGTATTGAGTAACATAACGGTCGAGGATACTGACTCCGTGGGCGAGGCGCTGGAA
GTGGGCTGCGTGGCCAACGAACAGTGGCCAGAAGCCTGCGATCTGTTCGAGGTGGTGAGT
CTCCATTCGACTGCGAACGAGTTCACAGGAGCTCTGGTACTGAAAAGGTCTCTGGACTAC
AACGAGAAGCAGTTCTACCAGTTCCAGTTACACGCCACGGACGGGACCCTCAACTCGTCA
TCTCCGGTGGAGGTGAAGGTGGTGGACGTCCAGAACACCCCGCCGGTGTTCAGCGGGGCT
CTGAGCGCGGCCTTACCTGAAGACGCGCCCGTCGGCAGCCTCGCCCTCGTCATCAGGGCC
AAAGATGGAGACCGAGCACAGCCTAGAGACGTGCAGCTCGAACTGCTTACAAACCCAATG
GACTTCTTCGTACTGGACAGTAAGACCGGTGAACTGAGAACAGCTAAGCCTCTGGACAGA
GAAGCCCTGGCCGATCCGAACTCACCGCTCAATATTACGGTTAAAGCCACTGAGCTGGTG
GACGGCATCCCCGTGGAATCCCCGTTGAGTGTGACCCGGGCGGCGGTGGCTATCACCATC
CGCGATGTCAACGACGAGCCGCCACGGTTCAACCGCCGCGAGTACTCCGTGGAACTGCTG
GAGAGCCTCGCCCGGGGCACGCCGCTGCCACACCTGGACATGGTCGTCACTGACACAGAC
CTGGGCATGAATTCGGTGTTTTCATTGAGACTAGCCGATAACCTGGGTGCGTTCGTGGTG
GAACCCTCGGTGGCCACCGGCAGCGCCACCGTCACCTTAAGACTCAACTCCACCCTGGAC
TACGAGGATCCCAACCAGAGAAAGTTCATTCTGGAGGTGATCGCGGAAGAAGTCCACACG
TCTCCAGCGCTCTCGTCCAAGGCCAGTGTGACAGTGTCGGTGAAGGACGTCAATGATAAC
TCCCCGGAGTTCGCGGACGACTCCTACTCCGCCGGGGTCAGGGAGGACGCCGCTCCCGGG
ACCAGACTGGCCGCTATCAAAGCCACGGACAGAGATACGGGGAGATTCGGTACCGAGGGT
ATCGTGTACCAGCTGTCGGGTAACGGGGCGGAACTGTTCTCAGTGGAGCCGAGGAGTGGA
GTCATCAGTGTGGCAGAGTGCGCCAGCCCGGGGGTTGGACCCTGTCTGGACTACGAGACA
CGGAAGGAATACTTCTTACAGTACAAGGCTACAGATGACGACGGTGCAGGTCAGAGCAGC
GTGGTGTCTGTCCAGGTGTCGGTGAGGGACTCCAACGACAACCCTCCCGTGTTCCTGACG
CCGGTGTACCGAGCCTCCATAGACGAGGACGCCACTAAATTCGAACCGGAACTACAGGTC
CAGGCGCGCGACCTCGACCCGACGTCCGACGTGCGCTACTCCATCGTCTCTCCTCACAAC
CCTCCCTTCTGGGTGGAGCCTTCTTCCGGTCGCATCTCCGTGCTGCCCGGCAAGCTGCTA
GACGCCGCGGACAACAAATACATACTCACTGTGATGGCCTCTGACGGCCGCTTCAACGCG
ACGTGTCGCGTGGAGGTGACCGTCCGTGACGTCAACGACCACCCGCCCGTGTTCGCCACC
ACCACCTACGACGCCAGCGTGTCCGAGGACGCCGCCATCGGGGCGGAAGTGGCGGCGGTC
CAAGCGACAGATCTGGACAGTGGGATGAACGCTCAGATCAGATACAACATACAGAAGGGA
GCTCTGGACGCCTTCAGGATACACCAGGACACGGGGGTCGTAAGCGTGGCCGGCGGACTC
GACTACGACCGCAAGAACACCTACCACGTCCTCATCACCGCCACCGACATGGGTGTCCCC
AGTCTGACTGGCACCACGGAGTTGACGGTTCACGTGCTGAACGTGAACGACAAGAAGCCG
GTGTTCAAACCCGCGGTCCAAAGAGCCGGGGTGTCCGCAGACGCTGAGACCGGCACCCTC
GTGTACCAGCTCGTGGCGGAGGACCCTGACGCCGACGAAGGCAGCTTGAGGTTCGGGCGG
GGAGATAGACCCGTCAGGGCGGTGGACGTCAACGGACAAGAGGTGAAGGATGACGGCACG
ATAGCCTTGTGGTTCCTGGTGTCCCCGTCTGGCGAGGTGTTCGTGTCTCAAACCCCGGAC
CGCTCCCGGGCTGCGGTGGTCACGTTGCCCGTCTCCGTCACCGACCAGTCCGCGCCCGTG
CCGCAGACCACTGAGGGCGAGCTCATAATAACCATAGTGGACGTGAACCGTCAGCCGCCC
GTGTTCTCTCAGCCGGCGTACGTGGAGCGCCTGGTGGAGGAGCAGAGCCCGGGGACGGTG
CTGGCCTCCTACAGCGCCACGGACAAGGAGACGCCCATCGCCTCCATCGTCATACACCCG
CCCAGCCCGTACTTCGATATCGACAATGTCACCGGTGAAGTGAGGGTAGCCAGCCGTATT
GACTACGAAGCCACTCCGTCCTTGAACTTCACGCTGGTGGCGTACGACTCTGGCGTCCCT
CAGCTGTCGTCGTCGGCGGCTGTGTTCGTCGAGGTGGTCAACATTAACGACGAGAGGCCC
GAGTTCAGCGCCGACCTGTATAACGCTACGGTGGAGGAACACTCCACACCTGGGACCAGT
GTGCTGAACGTGTCTGCTGTAGACCTCGATGCAGGTGGCGACTTCGGCAAGATAACCTAC
AGTCTGTCCGGGGAATCAGCCAGCCTGTTCACCATCAGTCAGGAGGGAGAGATCACAGTG
GCGGAGGGAGCGGATATCGACAGGGAAACCACCTCAGAGCTGTGGTTCCGTGTGGTCGCC
ACAGATAACGCGCCGCCACAGACTAAAAAATCTTCCAGTGTACCGGTCCACGTCATCATC
ACGGATATCAACGACAACCCGCCGGTGTTCAGTCAGCGTGTGTATAAGGGCAGCGTGTCG
GAGAACGTGCCTCTGAGTCCCCCGCCCGCCCTGCTGCAGTTGAGGGCGGAGGATCTCGAC
CAGGGCGAGTACGGAACCGTCACATACAGTATCGAGGACCAGAGTCAACCAGGAGTGTTC
CGTGTGGATCCCCAGACGGGCATCCTGTCTCCAGTGCGGCCGGTGGTAGGCGGCGCCCTC
TACCAGCTGGTGGTGGCGGCCAGTGACGGTAGCCACCGCGACACCGCTCGAGTCGACATC
ACAGTACTGAGCGTCAACAAACACAGCCCCGTGTTCGTGCAGCCGCCGCCAGATGTCAGG
CGAATCGAAATACCCGCTCACGCGGCTCAAGCTGGCTACCTCATAACGACCATCCAAGCC
ACGGACGAGGACCCGGGGGAGAACGGCCGAGTGACGTACCATCTCAAAGTGGACAACCAG
AACGTTGGACACACCGAGGAGTTCAGTCTGGATCCTGTGACAGGACAACTCACCACCAGG
GTACCTTTGGACATCGACAGCCAGGCGGAGTACCAGCTTATCGTGTCTGCGTCTGACGGC
GGTACTCCCAGCCAGTTCGAGGCCCTCCGCGTGCTGCAGGTGGTGGTGGTGGACGATCAG
GACCACGCGCCGGCCTTCCTTCACAGGCACTACCACTTCAGCGTCACGGAAAATTTACCC
TCCGGCGTCATAGTGGGCACGGTGAAGGCCATAGACAAAGATAGAGGAGACAATGGGAAG
GTGTACTATCATATACTGGAGGGGAACCAGGACGGCGCCTTCACACTCGACAGGACCCAG
GGCATCATAAGGGCCAGCATGAGCTTTGACAGGGAAAAACAGGACGAATACTCCATGACA
GTATACGCCAGCAACAATCCCATACTAGAGCATGCGGCGGCCATCTTGAATTCCATAGAC
AACAGCACGGAGAGCCAAGACGTCAGCGTCACCACCATCAAGATCAGAGTACTCGACGAA
AATGATAACGAGCCTAAATTTGAACAGAAGGTGTACTACGCGGGTGTATCTCCAGGTGCT
CGTGTTGGCGAGGTGATAACGTCACTGGTGGCTCGTGACCCTGACCTGGGCGTGAACGGT
TCCCTGCTCCTGGCGGTGGCAGCCTCTCACCTGTATAAGTTCGGCTCCACCACCTCTAGT
GGCAGCGTTGTGCCTTCACCTTTCAATATTACACAGGACGGTGTATTGACGACGGCCACC
CTGATGTCCGACTACCGCCAGGACAGGTTCGTGCTGGACGTCATCGCCCAGGAGTTGGCG
CCCCCTCACCGACAGGACACCGCGCAGGTCTATATCTGGATCATCGATCGTTCGTCGGTC
CTCCGGCTGGTGGTGTCTCGTCCGTGTTCCTCAGCGGGCGCGCCTCACGCTCGCTTGTCG
TCGGCGGCGCGGGCCCTGCTGGTCCCGGGGCGGAGGGCCGCGGTACACACCGCCGGGGAC
GGCAGATGGTGTGAGCTCCAACTGCACGCCGTGGACCCCGTCACCTTCCAGGTGTTGGAT
GTCCGGCGTGTTCTGGAGGACATCGACGCCCAGTACGACGCGCTCCGCCAGCTCTACCAG
GAGTATGGAGTAGAGACGCTCACAGCCGCCGCATCAGGAGATAAAGCTCCTGAGAGCTTC
GATCCAGCTCTTGCAGCACTTATAGCGCTTCTGATAGTGCTGTTCACTGGCATCGTCACA
TTCATCGTGGTCTGCGCCTGTCTTAAACACTGGGTGGTGCCGCCGCCGTCACTACAGTCC
AGTAAGGGAGATAGTCTGGCGCGGAGGAGGATCCTGGAGGAACTCAGCACCACCGAGAAC
CCGCTGTGGCTGGAAACCAAGCTCAGGCCGTACGAGGAACAGGAGCTGACCATGAACGTG
TTCGGCGACACACAGGAACACTTACAGGAACAGAATCCCGTGGTGGACAACACGTACGCC
ACCATCGAGGGAGGCCGCTCCAGGTGTGAAGACTACGCCACGCTGACACCAGACCTGCAT
CAGCTGGAACACGCCACCACAGCGCTGGAAGCAGCTCTAGGATTCCAGGGCAGTACGTTC
AAGCCTGAGAGAGAGACTCCCGAGCCGCCTCCTCGACCCTGA
Protein sequence:
MAAGVLDSSDLLTIKYGLVGTDKFAVNSDTGNVTLIQPLDREKEDTIKFLVSLENSDPGS
GQTLVQTQSVTVIIVDENDNPPLFKNSPYEVNVAEDEVVGTTVLSNITVEDTDSVGEALE
VGCVANEQWPEACDLFEVVSLHSTANEFTGALVLKRSLDYNEKQFYQFQLHATDGTLNSS
SPVEVKVVDVQNTPPVFSGALSAALPEDAPVGSLALVIRAKDGDRAQPRDVQLELLTNPM
DFFVLDSKTGELRTAKPLDREALADPNSPLNITVKATELVDGIPVESPLSVTRAAVAITI
RDVNDEPPRFNRREYSVELLESLARGTPLPHLDMVVTDTDLGMNSVFSLRLADNLGAFVV
EPSVATGSATVTLRLNSTLDYEDPNQRKFILEVIAEEVHTSPALSSKASVTVSVKDVNDN
SPEFADDSYSAGVREDAAPGTRLAAIKATDRDTGRFGTEGIVYQLSGNGAELFSVEPRSG
VISVAECASPGVGPCLDYETRKEYFLQYKATDDDGAGQSSVVSVQVSVRDSNDNPPVFLT
PVYRASIDEDATKFEPELQVQARDLDPTSDVRYSIVSPHNPPFWVEPSSGRISVLPGKLL
DAADNKYILTVMASDGRFNATCRVEVTVRDVNDHPPVFATTTYDASVSEDAAIGAEVAAV
QATDLDSGMNAQIRYNIQKGALDAFRIHQDTGVVSVAGGLDYDRKNTYHVLITATDMGVP
SLTGTTELTVHVLNVNDKKPVFKPAVQRAGVSADAETGTLVYQLVAEDPDADEGSLRFGR
GDRPVRAVDVNGQEVKDDGTIALWFLVSPSGEVFVSQTPDRSRAAVVTLPVSVTDQSAPV
PQTTEGELIITIVDVNRQPPVFSQPAYVERLVEEQSPGTVLASYSATDKETPIASIVIHP
PSPYFDIDNVTGEVRVASRIDYEATPSLNFTLVAYDSGVPQLSSSAAVFVEVVNINDERP
EFSADLYNATVEEHSTPGTSVLNVSAVDLDAGGDFGKITYSLSGESASLFTISQEGEITV
AEGADIDRETTSELWFRVVATDNAPPQTKKSSSVPVHVIITDINDNPPVFSQRVYKGSVS
ENVPLSPPPALLQLRAEDLDQGEYGTVTYSIEDQSQPGVFRVDPQTGILSPVRPVVGGAL
YQLVVAASDGSHRDTARVDITVLSVNKHSPVFVQPPPDVRRIEIPAHAAQAGYLITTIQA
TDEDPGENGRVTYHLKVDNQNVGHTEEFSLDPVTGQLTTRVPLDIDSQAEYQLIVSASDG
GTPSQFEALRVLQVVVVDDQDHAPAFLHRHYHFSVTENLPSGVIVGTVKAIDKDRGDNGK
VYYHILEGNQDGAFTLDRTQGIIRASMSFDREKQDEYSMTVYASNNPILEHAAAILNSID
NSTESQDVSVTTIKIRVLDENDNEPKFEQKVYYAGVSPGARVGEVITSLVARDPDLGVNG
SLLLAVAASHLYKFGSTTSSGSVVPSPFNITQDGVLTTATLMSDYRQDRFVLDVIAQELA
PPHRQDTAQVYIWIIDRSSVLRLVVSRPCSSAGAPHARLSSAARALLVPGRRAAVHTAGD
GRWCELQLHAVDPVTFQVLDVRRVLEDIDAQYDALRQLYQEYGVETLTAAASGDKAPESF
DPALAALIALLIVLFTGIVTFIVVCACLKHWVVPPPSLQSSKGDSLARRRILEELSTTEN
PLWLETKLRPYEEQELTMNVFGDTQEHLQEQNPVVDNTYATIEGGRSRCEDYATLTPDLH
QLEHATTALEAALGFQGSTFKPERETPEPPPRP