| New model in OGS2.0 | DPOGS210643 |
|---|---|
| Genomic Position | scaffold635:- 8612-13530 |
| See gene structure | |
| CDS Length | 1368 |
| Paired RNAseq reads | 18579 |
| Single RNAseq reads | 70232 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001800 (3e-35) |
| Best Drosophila hit | ribosomal protein L4 (1e-76) |
| Best Human hit | 60S ribosomal protein L4 (1e-71) |
| Best NR hit (blastp) | ribosomal protein L4 [Manduca sexta] (6e-110) |
| Best NR hit (blastx) | ribosomal protein L4 [Manduca sexta] (1e-94) |
| GeneOntology terms | GO:0006412 translation GO:0003735 structural constituent of ribosome GO:0022625 cytosolic large ribosomal subunit GO:0005811 lipid particle |
| InterPro families | IPR002136 Ribosomal protein L4/L1e IPR023574 Ribosomal protein L4 domain |
| Orthology group | MCL13505 |
Nucleotide sequence:
ATGAGCAAGAATTCTAGGCAACCCTACAGTGTGAGCAAGGAAGCCGGTCATCAAACCAGT
GCGGAGTCATGGGGAACAGGTCGCGCCGTCGCCCGTATACCCCGTGTCCGCGGCGGTGGT
ACTCATAGGTCCGGCCAGGGTGCCTTCGGCAACATGTGTCGTGGCGGCCGTATGTTCGCG
CCGACCAAGCCCTGGCGCCGTTGGCACCGTCGCGTCAATCTCCGCCAGCGACGGGCTGCA
GCGGCCGCAGCTGTTGCCGCGGCTGGTGTCCCAGCACTGGTTCAGGCCAGAGGTCACATC
ATTGAGAAAGTGCCAGAATTCCCGCTCGTAGTGGCAGATTCTGTCCAAGCCATTGAGAAG
ACAAAACAGGCTGTTATCTTCCTAAGAAGAGTAAAGGCTTGGTCCGATGTGCTCAAGGTA
TACAAATCTCAACGTCTCCGTGCCGGCAAGGGGAAGATGCGCAACCGACGCAAACTGCAA
AGAAAAGGACCTCTGATCGTTTACCACAAGGACCAAGGTCTATCCAAAGCTTTCCGTAAC
ATCCCCGGAGTGGAGACCATCAGTGTCAACAAACTGAACCTGCTGAAGCTGGCTCCGGGA
GGTCACATTGGACGCTTCATCATCTGGACTAAGAGCGCCTTCGAGAGGCTCGGACCCTTA
AACCTACCCCTGGGTCAAGTCCCAGCCGCTATTGAAGCTCCTCTCCCTGCATGGACCCGG
CGCCGCACGGTGCATCCATGGAATGATGACAAGTTTCGTCTCTATAAATTTGGACAAACT
CGGTCCACAGATACATGCACCTATGTCCACACGCGATGCTGTCGTAGCCTCGTGTGTTAC
TGCGAACCAGTGCTACATCAAAGAGACGGTGAGGCGTTCCGGGGCGCTCCCGTGACCGCC
ACGGACCCACTGTTTGGTTCCTGGAAGACACCATCCAAGCTTAAGAAGGGCTTCAACCTG
CCGCAGCCCAAGATGGCCAACACCGACCTGTCCCGCTTGCTCAAGTGCGACGAGATCAGG
AAGGTGCTGCGCGCTCCCAACAAGCGGGTCGTCCGAGCTCCTCGCAAGCTGAACCCTCTC
AGCAATGCTCGCGCTATGCTGAGACTCAATCCCTATGCGGCCGTTCTCAAGAGGAAGGCC
GTCTTGGACCAGAACAAACGCAACGATGCCAGGGCTCTGGCTCTGGCCGAGAAGAGAGGG
ATCTCCCTCCCATCCTCGGACCCGGCGGTGAGGGCTCGGCGTCTCCGCGAGAGGAGGGCC
AAGAGTCTGAAGCTGGCGGCCGCCAAGGCCCCCAAGAAGAAGGTGGAGAAGAAGACGCCC
CCCCCGCCCAAGAAGAAGGCGGACAAGAAGGAGAAGGCCAAGAAGTGA
Protein sequence:
MSKNSRQPYSVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFA
PTKPWRRWHRRVNLRQRRAAAAAAVAAAGVPALVQARGHIIEKVPEFPLVVADSVQAIEK
TKQAVIFLRRVKAWSDVLKVYKSQRLRAGKGKMRNRRKLQRKGPLIVYHKDQGLSKAFRN
IPGVETISVNKLNLLKLAPGGHIGRFIIWTKSAFERLGPLNLPLGQVPAAIEAPLPAWTR
RRTVHPWNDDKFRLYKFGQTRSTDTCTYVHTRCCRSLVCYCEPVLHQRDGEAFRGAPVTA
TDPLFGSWKTPSKLKKGFNLPQPKMANTDLSRLLKCDEIRKVLRAPNKRVVRAPRKLNPL
SNARAMLRLNPYAAVLKRKAVLDQNKRNDARALALAEKRGISLPSSDPAVRARRLRERRA
KSLKLAAAKAPKKKVEKKTPPPPKKKADKKEKAKK