| New model in OGS2.0 | DPOGS211865 |
|---|---|
| Genomic Position | scaffold127:- 316066-323564 |
| See gene structure | |
| CDS Length | 1275 |
| Paired RNAseq reads | 1093 |
| Single RNAseq reads | 2713 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001237 (0.0) |
| Best Drosophila hit | CG1673 (8e-133) |
| Best Human hit | branched-chain-amino-acid aminotransferase, cytosolic isoform 4 (1e-97) |
| Best NR hit (blastp) | branched-chain-amino-acid transaminase [Papilio xuthus] (0.0) |
| Best NR hit (blastx) | branched-chain-amino-acid transaminase [Papilio xuthus] (0.0) |
| GeneOntology terms | GO:0004084 branched-chain-amino-acid transaminase activity GO:0005737 cytoplasm GO:0005739 mitochondrion GO:0009082 branched chain family amino acid biosynthetic process |
| InterPro families | IPR005786 Branched-chain amino acid aminotransferase II IPR018300 Aminotransferase, class IV, conserved site IPR001544 Aminotransferase, class IV |
| Orthology group | MCL12610 |
Nucleotide sequence:
ATGCCTTTTCGTCGAAGCAAGGGTCTAGTGAAATGGATCTTCGAGAACCAGCACAAGATG
CAGTCCGTCCGCCGCTGCAGCTCGTTGGCTCGCTACAAGGAGATGGAGGACAGCGCCGCC
TCCGAACATGACGTCAGCGGACCCAAGACCCGTCCGGAGATCACGCCAGAAATATCCTTC
AAGCACGACGATCTTCAAGTGAGGCTCGCGGCGCCGTACCAGTTGCAGACGAAGCCGGAC
GCGGTCGAGTTAGGCTTCGGGAAGTACTTCACGGATCACATGCTCAAGATCCACTACAGC
AAGCACCTCGGGGGCTGGCAGAAGCCGGAGATCACGCCCTTCGAGAACCTCAGCCTCCAT
CCCGCCGCCAAGGCTCTACATTATGCAATACAATTATTCGAAGGTATGAAGGCGTATAGG
GGTGTAGACGACAAGATACGATTGTTTCGACCGGAACTCAATATGGAGAGGATGAACCTG
GCGGCTCAGAGGTCCGGCTTGCCCATGTTCGACGGCCAGGAACTGATCCGCTGCATCACG
AGGCTCATACAGATAGACCAGGAGTGGGTCCCTCACTCGGAGACCTCCACGCTGTACGTC
CGCCCCACGCTCATAGGCACGGAGCCCACGTTCGGCATCATGGAGCCGGAGAGCGCGCTG
CTGTTCGTGATCTTGAGTCCCGTGTCCGCCTACTATCAGACCCGCGGGGACGGCGCCGTG
TCCATCTTCGCAGACCCCGCCGTGGTGCGCGCCTTCCCCGGCGGAGTCGGCAACCGGAAG
GTCGGCTCCAACTACGGACCCACGATCGAGGCGACCGCGCGCGCCGCCAAGCTGGGCCAC
CAGCAGGTGCTGTGGCTGTTCGGCCCCGACAGAGAGCTGACCGAGGTCGGCGCCATGAAC
ATCTTCATGGTGTACATCAACGACCAGGGAGAGAGACAGCTGAGCACGCCGCCCCTCAAC
GGCCTCATCCTGCCGGGAGTGACGCGTCGCTCCATCCTGGAGCTGGCGTCGCAGTGGGAG
GACCTGGTGGTCAAGGAGGAGGTCATCACCATGGACCGCCTCGAGGACCTCAACGATCGC
GGCCGCCTGCTGGAGCTGTTCGGCGCGGGCACGGCCGTGGTGGTGACGCCCATCGCCAAC
GTGGGCTACCTGCACCGCAACATCCGCGTGCCCACCACCAGCCAGCCGCGGCCCGTGTAC
CGCCGCCTCAGGGACACGCTGCTCGCCATCCAGTACGGCCACGTCGACCACCCCTACGCC
AAGGTCATCGCGTAG
Protein sequence:
MPFRRSKGLVKWIFENQHKMQSVRRCSSLARYKEMEDSAASEHDVSGPKTRPEITPEISF
KHDDLQVRLAAPYQLQTKPDAVELGFGKYFTDHMLKIHYSKHLGGWQKPEITPFENLSLH
PAAKALHYAIQLFEGMKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGQELIRCIT
RLIQIDQEWVPHSETSTLYVRPTLIGTEPTFGIMEPESALLFVILSPVSAYYQTRGDGAV
SIFADPAVVRAFPGGVGNRKVGSNYGPTIEATARAAKLGHQQVLWLFGPDRELTEVGAMN
IFMVYINDQGERQLSTPPLNGLILPGVTRRSILELASQWEDLVVKEEVITMDRLEDLNDR
GRLLELFGAGTAVVVTPIANVGYLHRNIRVPTTSQPRPVYRRLRDTLLAIQYGHVDHPYA
KVIA