| New model in OGS2.0 | DPOGS211873 |
|---|---|
| Genomic Position | scaffold127:- 187506-190077 |
| See gene structure | |
| CDS Length | 1641 |
| Paired RNAseq reads | 907 |
| Single RNAseq reads | 2396 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001244 (5e-125) |
| Best Drosophila hit | ric8a (1e-66) |
| Best Human hit | synembryn-A (2e-52) |
| Best NR hit (blastp) | synembryn-A, putative [Pediculus humanus corporis] (7e-114) |
| Best NR hit (blastx) | synembryn-A, putative [Pediculus humanus corporis] (1e-108) |
| GeneOntology terms | GO:0005488 binding GO:0008150 biological_process GO:0005085 guanyl-nucleotide exchange factor activity GO:0005737 cytoplasm |
| InterPro families | IPR008376 Synembryn IPR019318 Guanine nucleotide exchange factor, Ric8 IPR011989 Armadillo-like helical |
| Orthology group | MCL14395 |
Nucleotide sequence:
ATGAACGACGAAGATATTCAAATATTAAATGGAAACAATTACTCACAAGTGAGCCAAATA
TTGGACGATTTCTTGAAAACTAACGATGATGTTTTCACATTTCCATATCTCTCCGAGAAC
AACAGGAGAGTTTCTTTGTGGGCTGCATTATTTCAACATTTACAAAATAAGTCTTCAGAG
CCAATACACACTCTGTGTTTAGCTACTATAAGGCTCTTAAGTCGGGATAAAAATGAACTA
GAGAGTCTTATTTGTGAAAAATGGGTACTAACATTAATTGAAAGAGCTGGTTTGTTTAAC
TTCGTCGACCCAGAGGACACTATGGATATCAACATGCCAGCCAAGGAAGTTGTGATGGAG
GCACTCAAATGTCTATGTAACATAGCATTTAACAGCGAAGTGGCCCGAGCTCTTTGTGCA
CATTCTAGTATTGCTCAGGGCCTTGTGGCTAGACTGAGATCTTACAAAGAGATACCGTTC
AAAGATGACATCATGCTGTTTGATATGAAGCTGCTTTTCATCTTGACGGCTCTGAGGCCA
GATATTAAGACGAAGATAAAGGATGAGCTGCATGGAATGGATTATTTGGTGAGCTGTATG
AACGAACTGGTGTTGGCATCTCACGAACCACAGCAGGATGTGGCCGGATGTACGGACATT
GAAATGAGTCATAACTGTTTACTGCTGGATCACCAGCAAGCCATTGCGTGCGAAATACTG
AAGACTCAATTCAACCTCACCTTGCACACGGGATCCAGCGACCCTGTCAGCGAGGAGGAG
GAAGTCATCTACTTGAAACTAATGCCCTCACTGACAGCGCTCCTGTATGCGCGCACGACC
TCACAGGAGAAACTTATGGAGTTGCATAGCAATATTGCCAATTTACTTACAAGTGTGCCG
CCAGTGTTCTACCAGTTTTTGACTCCTGAGCTGAATGAAGGTGAATCAGCCCAGTACGTG
TATGATGGTCATAACATGGATGCTCTGCAGTCCCTGCTGCAGCTTCTGCTGTACAGACTC
TCCATCACTGAGACGACGAAAAATCAGTACGAGAACCTGTCCCCGATACTCACGGTGCTG
AACAAGAGTGCGAGGAGTTGTCGAGTTCAAAGGAAGTTCTTGAGGCAGGAGGTGTTGCCG
CCGCTGAGAGACGTGTCCCGCCCGCCCGAGCAGGGAGACACTCTGAGGAACCAGCTGTGC
CGCCTCCTCACTACACCCATCACCTCCGTCAGAGACCTTGTCGCCGAGTTCCTCTTCATA
CTCTGCAAAGAAAAGGTCGGCAGAATGGTGAAGTACACGGGATTCGGCAATGCCGCCGGC
CACCTGGCACAGAAGGGGCTGATGGGTGGAGGGCGCGGGCCGGCGTACTCCTCCAGCAGC
GACTCCGACACCGAGGAGTACCGGGAGGCCGAGCCCCACATCGACCCCGTGGTGGGCTGC
ACCAGGCCGCCCCGGAACAACCCCTGGGAGGGAATGACTGACGAACAGAAGGAATACGAA
GCCATGAAACTCGTCAACCTGTTCGACAAGATGCTGTCCCAGGGAGTGGTGAAGCCGGCC
AGGGTGGGTCCGGACGGCCGGCCGCAGACCCTCGACCACGTCATGGAGCTCAGAGAACAG
CCGCACCGATCCAACTCATAA
Protein sequence:
MNDEDIQILNGNNYSQVSQILDDFLKTNDDVFTFPYLSENNRRVSLWAALFQHLQNKSSE
PIHTLCLATIRLLSRDKNELESLICEKWVLTLIERAGLFNFVDPEDTMDINMPAKEVVME
ALKCLCNIAFNSEVARALCAHSSIAQGLVARLRSYKEIPFKDDIMLFDMKLLFILTALRP
DIKTKIKDELHGMDYLVSCMNELVLASHEPQQDVAGCTDIEMSHNCLLLDHQQAIACEIL
KTQFNLTLHTGSSDPVSEEEEVIYLKLMPSLTALLYARTTSQEKLMELHSNIANLLTSVP
PVFYQFLTPELNEGESAQYVYDGHNMDALQSLLQLLLYRLSITETTKNQYENLSPILTVL
NKSARSCRVQRKFLRQEVLPPLRDVSRPPEQGDTLRNQLCRLLTTPITSVRDLVAEFLFI
LCKEKVGRMVKYTGFGNAAGHLAQKGLMGGGRGPAYSSSSDSDTEEYREAEPHIDPVVGC
TRPPRNNPWEGMTDEQKEYEAMKLVNLFDKMLSQGVVKPARVGPDGRPQTLDHVMELREQ
PHRSNS