| Genomic Position | scaffold51:+ 147323-179131 |
|---|---|
| See gene structure | |
| CDS Length | 588 |
| Paired RNAseq reads | 24 |
| Single RNAseq reads | 828 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007159 (5e-24) |
| Best Drosophila hit | lethal (1) G0156, isoform B (5e-15) |
| Best Human hit | isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial precursor (1e-10) |
| Best NR hit (blastp) | GJ15838 [Drosophila virilis] (1e-14) |
| Best NR hit (blastx) | GJ15838 [Drosophila virilis] (4e-14) |
| GeneOntology terms | GO:0005759 mitochondrial matrix GO:0004449 isocitrate dehydrogenase (NAD+) activity GO:0005739 mitochondrion GO:0006099 tricarboxylic acid cycle GO:0051287 NAD or NADH binding GO:0000287 magnesium ion binding GO:0055114 oxidation reduction GO:0005811 lipid particle GO:0005875 microtubule associated complex |
| InterPro families | IPR001804 Isocitrate/isopropylmalate dehydrogenase |
| Orthology group | MCL20831 |
Nucleotide sequence:
ATGTCGAAGAATTACATAAATGCTCTTTTGAAGCCTTTTCGTGAGAATAAAGTTGTATCA
AGTATACTAAAATTATTCGAGTCGGGCTCAAATAATCCTTCGGGAGGGGTTGTGGGTGTG
AAAAATGAGATCCCCGCGGGCCGGGCTGGTTCCGCTCAATACAGCACGGGGGTCCGTAAG
GTGACACTCATCCCTGGACACGGGATCGGCCCCGAGATCACGGTAGCTGTACAGAAAATA
TTCGAAGCCGCCAAAGTACCCATTGAATGGGACGAGGTGGACGTGACAGCTGTTAGAGGG
TTATGGCTTTTATTTAACCTTAGACAAGTCAAAAATCAGTTTCTTCCAACAGGGCGTCTT
AAGGCTTTCCCTTTTTTCCCTCATAAGGGAAAGCAAAACCATAACAAGAGAAAGAAGGAA
ACTCCCTTGGCACATCAGGCTGCTATCACAGTTCAAGCCAAGTCAGGATTTAGAAAAGAG
CAACCTCGTGCTCGTGCTGAGAAAGTTAATATAAAACATAAAGGGTTTCAAAGGGGTATA
AAATTACGGAGATTCAAGAACTCAGATGTACCAAGCAAAAGAATATGA
Protein sequence:
MSKNYINALLKPFRENKVVSSILKLFESGSNNPSGGVVGVKNEIPAGRAGSAQYSTGVRK
VTLIPGHGIGPEITVAVQKIFEAAKVPIEWDEVDVTAVRGLWLLFNLRQVKNQFLPTGRL
KAFPFFPHKGKQNHNKRKKETPLAHQAAITVQAKSGFRKEQPRARAEKVNIKHKGFQRGI
KLRRFKNSDVPSKRI