| New model in OGS2.0 | DPOGS212419 |
|---|---|
| Genomic Position | scaffold947:+ 4723-11905 |
| See gene structure | |
| CDS Length | 1725 |
| Paired RNAseq reads | 5170 |
| Single RNAseq reads | 16329 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002818 (8e-36) |
| Best Drosophila hit | thioredoxin reductase-1, isoform C (1e-139) |
| Best Human hit | thioredoxin reductase 2, mitochondrial precursor (4e-111) |
| Best NR hit (blastp) | PREDICTED: similar to thioredoxin reductase isoform 2 [Tribolium castaneum] (3e-170) |
| Best NR hit (blastx) | PREDICTED: similar to thioredoxin reductase isoform 2 [Tribolium castaneum] (2e-159) |
| GeneOntology terms | GO:0001666 response to hypoxia GO:0004362 glutathione-disulfide reductase activity GO:0008340 determination of adult lifespan GO:0005737 cytoplasm GO:0004791 thioredoxin-disulfide reductase activity GO:0042803 protein homodimerization activity GO:0045454 cell redox homeostasis GO:0005739 mitochondrion GO:0016209 antioxidant activity GO:0055114 oxidation reduction GO:0050661 NADP or NADPH binding GO:0050660 FAD binding GO:0005875 microtubule associated complex GO:0006974 response to DNA damage stimulus |
| InterPro families | IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase IPR016156 FAD/NAD-linked reductase, dimerisation IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IPR006338 Thioredoxin/glutathione reductase selenoprotein IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation IPR001327 Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region |
| Orthology group | MCL11065 |
Nucleotide sequence:
ATGGCACCTATAGATGGAACATATGACTATGATCTAGCGGTAATCGGTGGTGGTTCAGGG
GGTCTTGCTTGTGCAAAGGAAGCTGTGAACCTGGGTGCCAAAGTGGCAGTATTAGATTAT
GTGACCCCATCACCTCAAGGAACAAAGTGGGGCCTCGGTGGGACATGTGTCAATGTTGGT
TGCATACCAAAGAAGTTGATGCACCAGGCTGCGATACTCGGTGAAAGCATACATGGAATG
GTAAGTGAATGCTTGAATCCTTGGACCCTTCCATTGTTCCCGATCCCCGAAATCCCTTGG
AATCCTAAAGTTGATCCATATTGTAACAATACAAGTGAACGTGAACAAGAATATGCGGCT
GGCAAAGGAGAATTGATGAGCGCCAACTTCCTGCTATCGGCGGAAGATAGGATTTATTGC
AGTCGCAAGTTAGACAACCGAATAGTTCTTGGTGCAGATAATGGCTGCATTTCGGAAGCC
GTCGCCTACGGATGGGAAGTGCCTTCTATAAACCAGGTCAAAATAAACTGGTCGGCGTTG
ACCGAAGCCGTTCAGAATCATATCAAATCGGTCAATTGGGTCACCAGAGTGGACTTAAGG
GAGAAGAAGATCGAATATATCAATGGTTTGGGAGAGTTCAAGGATCCGCACACGCTGGTC
GCCACGCTGAAGAACGGGAACAAGAAGGAACTCACGGCTAAGAACATTCTGATAGCCGTG
GGCGGACGACCACACTACCCTGATATCCCTGGGGCCAAGGAGTACTGCATCACTAGCGAT
GACATCTTCAGCTTGAGCCATCCCCCCGGCAAGACGCTAGTCGTGGGCGCTGGGTATATC
GGTCTAGAATGCGCGGGTTTCCTCAACTCGCTGGGCTTCCCGGCGACGGTGCTGGTGAGG
TCGGTGCCGCTGCGAGGCTTCGACCAGCAGATGGCGGGTCTGGTCACCAGCGAGATGCAG
GAGAAGGGCGTGGTGTTCCAGCACAAGTGCGTGCCGCTCTCCGTGGAGCGGCTGGAGTCC
GGCCAGCTCAAGGCTCGCTGGATGAACACGGACACGCAGCAACAGAGCGAAGACGTGTTC
GACACAGTGTTACTGGCCACAGGAAGATATGCGCTCACCGAACAGCTCAACCTGAAGGCC
GCCGGGGTCACGACGTTGGACGATCACGGCAAGGTGGTCTCCAGCGACGAGTCCACCAAC
GTCCCTCACATCTTCGCGGTCGGCGACGTGTTGTCGTCGCGGCCGGAGCTGACCCCGGTG
GCGATCCACGCGGGCCGGCTCCTCGCGCGCCGCATGCTCGGCGGCGGGAAGCAACACATG
GACTACGACAACGTCGCCACCACCGTCTTCACTCCGCTGGAGTACGGCTGCGTGGGCCTC
AGCGAGGAGACGGCGCTCGAGAGATACGGCGCTGACAACGTGGAGGTGTACCACGCCTAC
TACAAGCCGACCGAGTTCTTCATACCTCAGAAGAACATTCGGAACTGTTACTTGAAGGCG
GTGGTCCGGCGCGAGGCTCCCTACCAGGTGCTGGGGCTTCACTTCGTGGGCCCCGCGGCC
GGGGAGGTCATCCAAGGCTTCGCCGCCGCTATCAAGTGCGGTTTGACCATGGAACAGCTG
ATGAACACGGTGGGCATCCACCCCACGGTGGCCGAGGAGTTCACGAGACTGAACATCACC
AAGAGGTCCGGCAAGGATCCCAACCCCGCCTCCTGCTGCAGCTAG
Protein sequence:
MAPIDGTYDYDLAVIGGGSGGLACAKEAVNLGAKVAVLDYVTPSPQGTKWGLGGTCVNVG
CIPKKLMHQAAILGESIHGMVSECLNPWTLPLFPIPEIPWNPKVDPYCNNTSEREQEYAA
GKGELMSANFLLSAEDRIYCSRKLDNRIVLGADNGCISEAVAYGWEVPSINQVKINWSAL
TEAVQNHIKSVNWVTRVDLREKKIEYINGLGEFKDPHTLVATLKNGNKKELTAKNILIAV
GGRPHYPDIPGAKEYCITSDDIFSLSHPPGKTLVVGAGYIGLECAGFLNSLGFPATVLVR
SVPLRGFDQQMAGLVTSEMQEKGVVFQHKCVPLSVERLESGQLKARWMNTDTQQQSEDVF
DTVLLATGRYALTEQLNLKAAGVTTLDDHGKVVSSDESTNVPHIFAVGDVLSSRPELTPV
AIHAGRLLARRMLGGGKQHMDYDNVATTVFTPLEYGCVGLSEETALERYGADNVEVYHAY
YKPTEFFIPQKNIRNCYLKAVVRREAPYQVLGLHFVGPAAGEVIQGFAAAIKCGLTMEQL
MNTVGIHPTVAEEFTRLNITKRSGKDPNPASCCS