| New model in OGS2.0 | DPOGS206544 |
|---|---|
| Genomic Position | scaffold74:+ 28789-36821 |
| See gene structure | |
| CDS Length | 4209 |
| Paired RNAseq reads | 947 |
| Single RNAseq reads | 2948 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005906 (9e-74) |
| Best Drosophila hit | rho-type guanine exchange factor, isoform C (6e-113) |
| Best Human hit | rho guanine nucleotide exchange factor 7 isoform a (3e-73) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC014788 [Tribolium castaneum] (3e-156) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC014788 [Tribolium castaneum] (1e-121) |
| GeneOntology terms | GO:0005085 guanyl-nucleotide exchange factor activity GO:0050807 regulation of synapse organization GO:0005089 Rho guanyl-nucleotide exchange factor activity GO:0035023 regulation of Rho protein signal transduction GO:0005622 intracellular |
| InterPro families | IPR001452 Src homology-3 domain IPR000219 Dbl homology (DH) domain IPR001849 Pleckstrin homology domain IPR011993 Pleckstrin homology-type |
| Orthology group | MCL11651 |
Nucleotide sequence:
ATGTCTGTTGAGAATTGCTTAGTGAAGGCAATTTATTCATTCAAGGGTAAAAACAATGAT
GAATTATGTTTCAAGAAAGGTGACATTATTACAGTCACTCAGAAGGAGGAAGGTGGCTGG
TGGGAGGGAACATTAGGTGAAACAACAGGATGGTTCCCTAGTAACTATGTTACTGAATAT
AAAGATACTTCTGGGTCACTGACTACATCACCAATAAGAGCAGCTTCAGAAATACAGGCT
TTTAGAAATGTAGTTCTAAAAGACATAATTGATTCAGAAAAGGCTCATGTAGCAGAAATG
CAGGGTCTTGTCAGCAATTTCTTGCAGCCGTTAGAAAAGAGTGATATATTGGTTAAAGAT
GAATTTAAGCAGCTGACCGGAAATATAAATGAGGTGCTGCAAGTGCATGAGCAGTTCCTC
TCTCTTTTAGAGGAATGTGCAATGAAGACAGGGCCAGACCAAAGAGTGGGAGGGTTATTC
TTACAGTGGGCGCCAAAGATCAAGACAGTACATCTGACATACTGTGGTGGACACCCAAAA
GCAGTCTGCGTTCTTGATAAATACAAGGAAGAACTGAATACCTGGATGGAAAATGCCGGA
GCAGTGTGTCCGGGGGTTCTTGTTCTTACTGCCGGTTTATCAAAACCATTCCGACGTCTC
GGAAAATACCCTGCCATGTTGCAAGAACTGGCTCGCCATGTCCATGAAGCTCATCCAGAC
AGGGGTGACACTCATAGAGCATCTGTTGTTTACAAAGATATAGTTAGTGCCTGTGCAGCT
TTGAGGCGTCAGAAGGAGTTGGAACTTCAAGTTGTGACGGGTGAAGTCCGTGGCTGGCCT
GGTGGTGAGCTCACGTCACTCGGCGATGTTTTACACATGGGTAGTGTTGCAGTTGGACCG
TCACATCAGGATAGATATCTCGTACTCTTTCCTTCGGCTTTGCTACTACTATCAGTTAGT
AAACGCGTATCTGCGTTTGTTTACGAGGGATGTCTTCCATTAACTGGTATAAATGTATGC
AAGCTAGAGGATTCAGATACAAGGAAAAATGCATTTGAAATAAGTGGTCCAATGATAGAT
ACTATTGTTGCTGTTTGCCAAACCAGAGCTGAAGCTGATAATTGGGTCAGCTTGCTTCAG
AAGCACTCGAACAACAGCAGCCCTTCACATGAGCCTTCCCAGCCGCAATCACTACCTCAT
TTGACCCGATCTCCTTCTGAAGGGGCTCTCTCTAGCATCAACTCTAGTAGACGCAGTTTA
TATCACGTGACCCTGCCACCGTCGCACTATCCGTCCGCATCCCCATATTATTCATTAACA
AAATATTTTGCAAGGTTGGTCAAAAAAAAGGTCATCACTAGGCAAATGTTGCGTAAACTT
CTACACGAAAAGCCTTGGGCTAAAGCGTTCGAACTCACCGGCCTGCCAGTGATGAGACGA
CATAAAAATCACATAAAGCTCAAAATAGATAATGATGGAACTATCGCTGAAACTGATTAT
TCTGATAGCGATAGGAATTCTGAAGACAGTGATAGGGAAGTGGAAACGACTGAAAGTTGT
TCCACTTCCAGCTGCACTAACTCAGCATCAGCTGGCACGAATAATTCATCTAAAATGATG
AGACAGGATGCAGTCGAAAGTATCGGACCTAGAACAATTTCTTCTTCCTGTAGCAGTTGG
TGTAGCAATTTTGGTTATGTCAGATACTTTGATACGTCAACAGACATGATGCTCGATGCA
CCAAACCCAAAAGGTGACTGCACGAAAAATATATTTGCCTCTGTACCTAAAAGAGCAGAT
GCCAATGTAAATGAATATAATTTACAAAAATCTTCGAAATCCAATAATTTGAATGTTTGC
ATCCCTTACCAACATTCCGGTAGCGCAGAAAATTCTAGTTTAGAAATAAAAAATTATATG
GCTTGTGAAGATTTAGTGAATATAGATCAGGATATGCAAATAAATAATTTTGTCGACGAG
ACAGATTATGTGCCGACGAGGCGAAGCTTTCCTAACTACAGCGTAAGAAACGATATCCCA
AAGTTGTGGAAGTCCACCGAAGAAAGGTATACAAGAGAAGAAGAAATTAATAACAATCTT
ATGATATCTGATTTATTACAAGTTCTTGATCCTCCATCGCCTAAAAATCCACGAGATTCT
CTTCTAGAATCACTTATAATAGATCCACCTCCGATGTTTCGTAACGAAAATGACGACCTT
AAAATTCTAAATGTGAATCTAAATGCCAACGTTCCTTTCCGAAAGCATTCACTAAACTCG
GACAAAAAGATTAGACGTTCGACGTCAAGGTCAATGGTGGAGACGGATAAGAAAAATAAT
AATGGACATTTGGAGAGAATGAGTTCACAGTCTGAAACGTCTAAAGTTAGGCGAAAATGT
GAATGCTGCAATCGTTCTTTATGTCCAAGTCCCAGATCTTCAGACTCTGGGGTCGCTGGT
AGCTGCAATTTAGCGTCACCTGATTTAAACATGCACGGCAATGATTCGGATAGCCATGAG
AAAACATCAAATGACATGAAAGATTCTCTCAACAACCTATCTGATAGTAACTTTAATAAT
AGAAAGTCAACTTTATCTGAAATCGAAGCAGCGACATTTGAAGATCAATGTAGATGTACG
TCTCCTTTCGGGTCGACTGCTAGAACCTCGTGTGTGACAAGTGTAACCTCCGAAATGAGT
CTAGACGTGAAGGATTTATCTAAAGCAAACGTAACATCTACTTTCACCGCCCATCCACCA
GTGCCCTCTCCCGAAATCAAACGAACATCGATCAGAAGGAACATCGACCTATACGTGCCG
GAAATTAAAATTAAGCCAGCGGTTCCACCGCGTATTTATAGGAAGCCAAGCACCCATTTG
GAGATACCAAAAAATGTGCGACATCACATGCCATGTCAATGGAGCACATTGAATATTACT
GAACGAACAAAACCGAGCTTGCATTATCACATGCGGATATACCGGGAGAAACCGGAAGAT
AATATGCACAGACTATCAAGAAAAGATATGACAAGAAATTGCGATGTTTTCAATAAAGAA
CACAAACGGAAGGATGAAAAGACTTCGACATCCCAAAAGACGCGGTCACGTAGTGAGGAT
TTGGCCAAACTGCAGAACGGTTTAACGGAAGCTCAGACTGGTTTCGTGGTCTATCGTTCA
GATCTGTACGCACACTGGTGGATGAAAGCCAAATTACCGATAACCGTGGTCACCGACTCA
GGCAAGGATAATTTTTTTATGGCCTTGAGCGACAGCAATAACGAATTGTCCTCTGGTCTC
ACTAGTCACAAGAGATCCCATTCATTCAACAATCATCAAAGCTTCACACAGCACACGCAG
CAAACACAAAAGAATAAGTCAAAAAATCAATCGGCGCGTTGGCTCCTAAACTCCTGTGAC
TCACTCGATCAATCGCCAGCTAAATCAAAAATACCTATAGGAAAGAAATTCCCATCCGTG
GATTTCACCGACGCAGCAGACATAAGCTACATTAGTAAAGGGTGGAGCATAACATGTCTT
CGTCCGGCGCCGCCTTTACGTCCGCAGTCATTTACTGTGGGTTCAGATGAGAACATCGGC
CCCACACACCCGTACGCGCCCCACCAGAGGAAATCGAACTCCTACGAGGAAGATGCCCTC
ATACTGAAGGTCATAGAGGCTTATTGCACTTCCGCCCGGTGTCGCAACGCTGTTAGTTCG
GAGGTCAACCAGAGTCGGTCAGTTCTGAATGTTTCTATTTTGTTACATGCGGCCGCCTTT
ATACCACCTGCAGTGGACTACTCCCATTATAATTTCGGTAAAGTACAATATCATGCACCC
GCTACTAACATGCCTCTTACGCACACTAAACTGTCGGTGACGTCAGACAGGAGTACCAAA
GTGAAGCGGAACAAGAGCTCGGCCGACGCTTACATGTACCGGGCACCTGATAGGAGATTA
GTGCCGGATAGGAAGTACAACCTGAATAGATCTAATCCAAATCTATGGGATTGCGCTGAG
CGGAGGCGGACGAATCTGATTGGTGGGAACGAACGGAGGAGCGGCTCCCAGCCGAGTCTC
GTGCCCCTTCGCGCTACCACTTCCCCCCATCCAATCCAGCCGTCACAACCGCCACGCTCA
GCGCGTTCGTCTACATGGTGCTGTGGGACATTCGTCAAGCAGCTAACTAAATCCCATCAT
TTCGACTGA
Protein sequence:
MSVENCLVKAIYSFKGKNNDELCFKKGDIITVTQKEEGGWWEGTLGETTGWFPSNYVTEY
KDTSGSLTTSPIRAASEIQAFRNVVLKDIIDSEKAHVAEMQGLVSNFLQPLEKSDILVKD
EFKQLTGNINEVLQVHEQFLSLLEECAMKTGPDQRVGGLFLQWAPKIKTVHLTYCGGHPK
AVCVLDKYKEELNTWMENAGAVCPGVLVLTAGLSKPFRRLGKYPAMLQELARHVHEAHPD
RGDTHRASVVYKDIVSACAALRRQKELELQVVTGEVRGWPGGELTSLGDVLHMGSVAVGP
SHQDRYLVLFPSALLLLSVSKRVSAFVYEGCLPLTGINVCKLEDSDTRKNAFEISGPMID
TIVAVCQTRAEADNWVSLLQKHSNNSSPSHEPSQPQSLPHLTRSPSEGALSSINSSRRSL
YHVTLPPSHYPSASPYYSLTKYFARLVKKKVITRQMLRKLLHEKPWAKAFELTGLPVMRR
HKNHIKLKIDNDGTIAETDYSDSDRNSEDSDREVETTESCSTSSCTNSASAGTNNSSKMM
RQDAVESIGPRTISSSCSSWCSNFGYVRYFDTSTDMMLDAPNPKGDCTKNIFASVPKRAD
ANVNEYNLQKSSKSNNLNVCIPYQHSGSAENSSLEIKNYMACEDLVNIDQDMQINNFVDE
TDYVPTRRSFPNYSVRNDIPKLWKSTEERYTREEEINNNLMISDLLQVLDPPSPKNPRDS
LLESLIIDPPPMFRNENDDLKILNVNLNANVPFRKHSLNSDKKIRRSTSRSMVETDKKNN
NGHLERMSSQSETSKVRRKCECCNRSLCPSPRSSDSGVAGSCNLASPDLNMHGNDSDSHE
KTSNDMKDSLNNLSDSNFNNRKSTLSEIEAATFEDQCRCTSPFGSTARTSCVTSVTSEMS
LDVKDLSKANVTSTFTAHPPVPSPEIKRTSIRRNIDLYVPEIKIKPAVPPRIYRKPSTHL
EIPKNVRHHMPCQWSTLNITERTKPSLHYHMRIYREKPEDNMHRLSRKDMTRNCDVFNKE
HKRKDEKTSTSQKTRSRSEDLAKLQNGLTEAQTGFVVYRSDLYAHWWMKAKLPITVVTDS
GKDNFFMALSDSNNELSSGLTSHKRSHSFNNHQSFTQHTQQTQKNKSKNQSARWLLNSCD
SLDQSPAKSKIPIGKKFPSVDFTDAADISYISKGWSITCLRPAPPLRPQSFTVGSDENIG
PTHPYAPHQRKSNSYEEDALILKVIEAYCTSARCRNAVSSEVNQSRSVLNVSILLHAAAF
IPPAVDYSHYNFGKVQYHAPATNMPLTHTKLSVTSDRSTKVKRNKSSADAYMYRAPDRRL
VPDRKYNLNRSNPNLWDCAERRRTNLIGGNERRSGSQPSLVPLRATTSPHPIQPSQPPRS
ARSSTWCCGTFVKQLTKSHHFD